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The map label for this gene is slyX

Identifier: 74318445

GI number: 74318445

Start: 2496228

End: 2496431

Strand: Direct

Name: slyX

Synonym: Tbd_2427

Alternate gene names: 74318445

Gene position: 2496228-2496431 (Clockwise)

Preceding gene: 74318444

Following gene: 74318451

Centisome position: 85.79

GC content: 63.24

Gene sequence:

>204_bases
ATGAGCGACGCACGCATCACCGAACTCGAAACCAAACTCATCTTCGCCGAAGACCTGATCGAAACGCTCAACCAGACCGT
GATCCGGCAACAGGCCCAGCTCGACCAGATCCAGCAGCAGCTGCGCCTGCTGCACCGGCAATTGCAGGACGCGCTCGCGC
GCGAGGCCCCAGCGCCGGGAAACGAACCGCCCCCACACTACTAG

Upstream 100 bases:

>100_bases
AGGGGCGGATACGACACAAGATCGCCGGTCAGGTGCATTATCCGGGACTGGAAAAACGCATTGTGCCGCCGCGGCAGTCC
CGGGCGGCCGAGGAACCGCG

Downstream 100 bases:

>100_bases
CGCGGCACGTGCTTTCGTAAGAACACGCGATCGCGGGGAGAGCTCCATGAGAACGAAACGCGCGTAGCGCCCAGACGGTA
CACCGGTCGGCTGGTGCCGC

Product: SlyX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSDARITELETKLIFAEDLIETLNQTVIRQQAQLDQIQQQLRLLHRQLQDALAREAPAPGNEPPPHY

Sequences:

>Translated_67_residues
MSDARITELETKLIFAEDLIETLNQTVIRQQAQLDQIQQQLRLLHRQLQDALAREAPAPGNEPPPHY
>Mature_66_residues
SDARITELETKLIFAEDLIETLNQTVIRQQAQLDQIQQQLRLLHRQLQDALAREAPAPGNEPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_THIDA (Q3SG76)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_316185.1
- STRING:   Q3SG76
- GeneID:   3673937
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_2427
- NMPDR:   fig|292415.3.peg.2500
- HOGENOM:   HBG700945
- OMA:   RPEDEIP
- BioCyc:   TDEN292415:TBD_2427-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 7716; Mature: 7585

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDARITELETKLIFAEDLIETLNQTVIRQQAQLDQIQQQLRLLHRQLQDALAREAPAPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NEPPPHY
CCCCCCC
>Mature Secondary Structure 
SDARITELETKLIFAEDLIETLNQTVIRQQAQLDQIQQQLRLLHRQLQDALAREAPAPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NEPPPHY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA