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The map label for this gene is yibP [H]

Identifier: 74318411

GI number: 74318411

Start: 2465403

End: 2466641

Strand: Reverse

Name: yibP [H]

Synonym: Tbd_2393

Alternate gene names: 74318411

Gene position: 2466641-2465403 (Counterclockwise)

Preceding gene: 74318412

Following gene: 74318410

Centisome position: 84.77

GC content: 65.7

Gene sequence:

>1239_bases
GTGAACGGAAAACGCTTCCTCATCCTGTTGCTGCTCTGCCTGCCGCTGTACGCCGCGGCCGATCAGGCCAGCCGCAAGCG
GTCCGAGCTCGACGCACTCAAGCAGCGCCTGCAGACGCTTCAGCAGCAATTCCGGGATACGCAGGCCGACCGCAAGGAGG
CGGTCGATGCGCTGCGGGACTCCGAACGCGCCATCAGCAGCGGCGTGCGCCAGTTGCGTGAGCTCGATCAGAAGCGCGCC
CAGGCACACGGCGAACTGCAGAAGCTCGGCGCGCAGGCGCGGCTGACCGCGGATCGTGTGACGGAACAACAGGAGCGCCT
GGCGCATGTGCTCAAGAGCGCCTATCGGCGCGGCCAGGGCGACCCGCTCAAACTCGTGCTCAACGGTGGCGATCCGAACC
AGGCCGCGCGCGACCTGCGTTATCTTTCCCACGTCTCGCGCGCCCGTCACGCGATGATCGCGACGCTGCGGGCCGATCTC
GCGCAGCTCGCGATGCTCGAGCAGCAGGCGGCGGAAAAGACGAGCGAGCTGACCGAGCTACAGGCCGCACGCGAGGCCGA
GCAGCGCAAGCTTGTGGCTGACAAGCAGGCGCGCGAGCAGACGCTGCAGAAGCTCTCGCTTCAGATACAGCAACAGCGTC
GCGAAATTTCCAATCTCAAGCGCGACGAGCGCAACCTGACCCGACTCGTGCAGCGCCTCAACCGTGTCATGGCTGAGCAG
GCCGCGCGCGAGGCGGCACGGAAGCGCGCGGCGCGGAAGAGCGCGCCCTCGACAGCCGAATCGTCCCGGTCGCGGCGACC
GCTCGGCGTCAATACCGAAACGCCGGTCGCGTTCGAGTCGGATCGGCCGTTCTCCCGGCTCAAGGGATCGCTGCACCTTC
CAGTCGCCGGGGAACTGATGAACCGTTTTGGTGCTCCGAGAGAAGGCGGCGGGACGAGCTGGAAAGGCATCTTCATCCGT
GCCGCGCAAGGTAGCGCCGTGAAGGCGATTGCGGCCGGCCAGGTCGTTTTCGCCGAGTGGTTGCGAGGGTTCGGCAACCT
CATCATCGTCGACCACGGCGAGGGCTACATGAGCCTGTACAGCAATAATGAAAGTCTGTATAAGCAGGTGGGCGAGCGGG
TTAAACCCGGCGATCCTATCGCCGCGGTGGGCAACAGCGGGGGCCAACCGGACTCCGGCCTGTACTTTGAAATGCGGCAT
CAGAGCCGCCCTGTTAATCCCCTCGGGTGGGTGAAGTGA

Upstream 100 bases:

>100_bases
GCTGCTCAGAATGATGGGTCTGCCGCAGCCACCCGAAATGAGCGGGGAATCGCTGCTTGCGTTCGAGTAAACGCGCGGCC
CTTCGAGTAAGCGCGCGAGG

Downstream 100 bases:

>100_bases
GATGACACAGAAGTCGAAATTCGTTCTCGTCGGTGTGGCCGGCGTGCTGGCGGGCGCTGCCCTCACGCTCAATCTTTCGG
CGATCGCCGACAAGGAGGCC

Product: M23 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNGKRFLILLLLCLPLYAAADQASRKRSELDALKQRLQTLQQQFRDTQADRKEAVDALRDSERAISSGVRQLRELDQKRA
QAHGELQKLGAQARLTADRVTEQQERLAHVLKSAYRRGQGDPLKLVLNGGDPNQAARDLRYLSHVSRARHAMIATLRADL
AQLAMLEQQAAEKTSELTELQAAREAEQRKLVADKQAREQTLQKLSLQIQQQRREISNLKRDERNLTRLVQRLNRVMAEQ
AAREAARKRAARKSAPSTAESSRSRRPLGVNTETPVAFESDRPFSRLKGSLHLPVAGELMNRFGAPREGGGTSWKGIFIR
AAQGSAVKAIAAGQVVFAEWLRGFGNLIIVDHGEGYMSLYSNNESLYKQVGERVKPGDPIAAVGNSGGQPDSGLYFEMRH
QSRPVNPLGWVK

Sequences:

>Translated_412_residues
MNGKRFLILLLLCLPLYAAADQASRKRSELDALKQRLQTLQQQFRDTQADRKEAVDALRDSERAISSGVRQLRELDQKRA
QAHGELQKLGAQARLTADRVTEQQERLAHVLKSAYRRGQGDPLKLVLNGGDPNQAARDLRYLSHVSRARHAMIATLRADL
AQLAMLEQQAAEKTSELTELQAAREAEQRKLVADKQAREQTLQKLSLQIQQQRREISNLKRDERNLTRLVQRLNRVMAEQ
AAREAARKRAARKSAPSTAESSRSRRPLGVNTETPVAFESDRPFSRLKGSLHLPVAGELMNRFGAPREGGGTSWKGIFIR
AAQGSAVKAIAAGQVVFAEWLRGFGNLIIVDHGEGYMSLYSNNESLYKQVGERVKPGDPIAAVGNSGGQPDSGLYFEMRH
QSRPVNPLGWVK
>Mature_412_residues
MNGKRFLILLLLCLPLYAAADQASRKRSELDALKQRLQTLQQQFRDTQADRKEAVDALRDSERAISSGVRQLRELDQKRA
QAHGELQKLGAQARLTADRVTEQQERLAHVLKSAYRRGQGDPLKLVLNGGDPNQAARDLRYLSHVSRARHAMIATLRADL
AQLAMLEQQAAEKTSELTELQAAREAEQRKLVADKQAREQTLQKLSLQIQQQRREISNLKRDERNLTRLVQRLNRVMAEQ
AAREAARKRAARKSAPSTAESSRSRRPLGVNTETPVAFESDRPFSRLKGSLHLPVAGELMNRFGAPREGGGTSWKGIFIR
AAQGSAVKAIAAGQVVFAEWLRGFGNLIIVDHGEGYMSLYSNNESLYKQVGERVKPGDPIAAVGNSGGQPDSGLYFEMRH
QSRPVNPLGWVK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=415, Percent_Identity=31.8072289156626, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789099, Length=116, Percent_Identity=42.2413793103448, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=33.6134453781513, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 45960; Mature: 45960

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGKRFLILLLLCLPLYAAADQASRKRSELDALKQRLQTLQQQFRDTQADRKEAVDALRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SERAISSGVRQLRELDQKRAQAHGELQKLGAQARLTADRVTEQQERLAHVLKSAYRRGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DPLKLVLNGGDPNQAARDLRYLSHVSRARHAMIATLRADLAQLAMLEQQAAEKTSELTEL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAREAEQRKLVADKQAREQTLQKLSLQIQQQRREISNLKRDERNLTRLVQRLNRVMAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAREAARKRAARKSAPSTAESSRSRRPLGVNTETPVAFESDRPFSRLKGSLHLPVAGELM
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHH
NRFGAPREGGGTSWKGIFIRAAQGSAVKAIAAGQVVFAEWLRGFGNLIIVDHGEGYMSLY
HHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEE
SNNESLYKQVGERVKPGDPIAAVGNSGGQPDSGLYFEMRHQSRPVNPLGWVK
CCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNGKRFLILLLLCLPLYAAADQASRKRSELDALKQRLQTLQQQFRDTQADRKEAVDALRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SERAISSGVRQLRELDQKRAQAHGELQKLGAQARLTADRVTEQQERLAHVLKSAYRRGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DPLKLVLNGGDPNQAARDLRYLSHVSRARHAMIATLRADLAQLAMLEQQAAEKTSELTEL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAREAEQRKLVADKQAREQTLQKLSLQIQQQRREISNLKRDERNLTRLVQRLNRVMAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAREAARKRAARKSAPSTAESSRSRRPLGVNTETPVAFESDRPFSRLKGSLHLPVAGELM
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHH
NRFGAPREGGGTSWKGIFIRAAQGSAVKAIAAGQVVFAEWLRGFGNLIIVDHGEGYMSLY
HHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEE
SNNESLYKQVGERVKPGDPIAAVGNSGGQPDSGLYFEMRHQSRPVNPLGWVK
CCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]