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The map label for this gene is ybjT [H]

Identifier: 74318379

GI number: 74318379

Start: 2434884

End: 2435921

Strand: Reverse

Name: ybjT [H]

Synonym: Tbd_2361

Alternate gene names: 74318379

Gene position: 2435921-2434884 (Counterclockwise)

Preceding gene: 74318380

Following gene: 74318378

Centisome position: 83.71

GC content: 67.05

Gene sequence:

>1038_bases
ATGAAGATTCAGCGCATTTGCGTTCTCGGCGGCTCCGGCTTCGTCGGTACCCACCTCGTCAGCCAGCTCGCCGCGCGCGG
GCTCAATGTGCGCGTGCTGTCCCGGCGCCGCGAAACCGCCAAGGAGCTCATTCTGCTGCCGACCGTCGAAGTGGTCGAAG
CCGATGTCCACGACGAGCACGAACTCGTCCGGCACTTCCGCGGCATGGACGCCGTCATCAACCTCGTGGGCATCCTGCAC
GAAGGCAAGGTCGGGCGCGCCGACCTGCCGAGCGCGCGGCGCGGCGATTTCCAGCGTGTCCACATCGAATTGCCGCGCAA
GATCGTTCATGCCATGGGCGAGGCGAACGTGCACCGCCTGCTGCACATGAGCGCGCTCGGCGCGGACCCCAATTCGCGTT
CGGCTTACCAGCGCTCCAAGGGCATCGGCGAGGCGCTGGTGCGCGAGGCTGGCCGTCGCCACGTCGAGCACGAAAACTGG
TATCTGAACGGCCCCAAGTTCATCCACGGCTACGGCCTCAACGTCACGGTCTTCCGCCCCTCGGTCATCTTCGGGCGCGG
AGATTCCTTCCTGTCGATGTTCGCCCGGCTGCTGAAGCGCTTTCCGGTGCTGCCGCTCGGCTCGGGCGACGCCCGCTTCG
CGCCGGTGCACGTCGAGGACGTCGCGCGCGCCTTCGCCGACAGCCTCGACAACGTCGCGACGTTTGGCGAGACCTACGAA
TTGTGCGGCCCCCGGGCCTACACGCTGCAGGAACTCGTGAGCTACGTCGGCGAAGTCACCGGCAAGCCCCGGCGCATCGT
TCCTCTTGGAAAGTGGCCGTCGTATTTCCAGGCCTGGGCGCTCGAGTTCAAGCCCGGCAAGAAGCTGATGACCCGCGACA
ACTACTACGCGATGGGAACGGACAACGTCTGTGCCGCGGGCTGGCCGGCGGTCTTCGGCTTCGAACCCGGTTCGCTCGAA
GCGATCGCGCCCGAATACCTGCGCGCCGACACGCCGCGCGCGCGCTACGAGGACTACCGCGAGACCGCCCGCCGCTAG

Upstream 100 bases:

>100_bases
CTCGCGGCCCTCACGGAACCACAAGGCTCTCTGGAACTCGGTCAGACGGACGATTAAAATCGGCGCTGCCTTCTATCCCT
ATATTCCTGCACACGATTCC

Downstream 100 bases:

>100_bases
GCGCCCCGCGCATGACATGAAGACCTACGTCGTCGGCGGCGCGGTGCGCGACCGCTTGCTGGGCCTGCAGGTCAGCGACC
GCGACCACGTCGTCGTCGGC

Product: nucleoside-diphosphate-sugar epimerase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKIQRICVLGGSGFVGTHLVSQLAARGLNVRVLSRRRETAKELILLPTVEVVEADVHDEHELVRHFRGMDAVINLVGILH
EGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRLLHMSALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENW
YLNGPKFIHGYGLNVTVFRPSVIFGRGDSFLSMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETYE
LCGPRAYTLQELVSYVGEVTGKPRRIVPLGKWPSYFQAWALEFKPGKKLMTRDNYYAMGTDNVCAAGWPAVFGFEPGSLE
AIAPEYLRADTPRARYEDYRETARR

Sequences:

>Translated_345_residues
MKIQRICVLGGSGFVGTHLVSQLAARGLNVRVLSRRRETAKELILLPTVEVVEADVHDEHELVRHFRGMDAVINLVGILH
EGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRLLHMSALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENW
YLNGPKFIHGYGLNVTVFRPSVIFGRGDSFLSMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETYE
LCGPRAYTLQELVSYVGEVTGKPRRIVPLGKWPSYFQAWALEFKPGKKLMTRDNYYAMGTDNVCAAGWPAVFGFEPGSLE
AIAPEYLRADTPRARYEDYRETARR
>Mature_345_residues
MKIQRICVLGGSGFVGTHLVSQLAARGLNVRVLSRRRETAKELILLPTVEVVEADVHDEHELVRHFRGMDAVINLVGILH
EGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRLLHMSALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENW
YLNGPKFIHGYGLNVTVFRPSVIFGRGDSFLSMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETYE
LCGPRAYTLQELVSYVGEVTGKPRRIVPLGKWPSYFQAWALEFKPGKKLMTRDNYYAMGTDNVCAAGWPAVFGFEPGSLE
AIAPEYLRADTPRARYEDYRETARR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=343, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI239745448, Length=297, Percent_Identity=24.9158249158249, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081793, Length=279, Percent_Identity=25.4480286738351, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17556106, Length=267, Percent_Identity=26.5917602996255, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24667554, Length=274, Percent_Identity=27.007299270073, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 38617; Mature: 38617

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQRICVLGGSGFVGTHLVSQLAARGLNVRVLSRRRETAKELILLPTVEVVEADVHDEH
CCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCHHHHHCCCCCHH
ELVRHFRGMDAVINLVGILHEGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRL
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHH
LHMSALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENWYLNGPKFIHGYGLNVTVFRP
HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEEECC
SVIFGRGDSFLSMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETYE
EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHH
LCGPRAYTLQELVSYVGEVTGKPRRIVPLGKWPSYFQAWALEFKPGKKLMTRDNYYAMGT
HCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHEEEECCCCCEEECCCEEEECC
DNVCAAGWPAVFGFEPGSLEAIAPEYLRADTPRARYEDYRETARR
CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIQRICVLGGSGFVGTHLVSQLAARGLNVRVLSRRRETAKELILLPTVEVVEADVHDEH
CCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCHHHHHCCCCCHH
ELVRHFRGMDAVINLVGILHEGKVGRADLPSARRGDFQRVHIELPRKIVHAMGEANVHRL
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHH
LHMSALGADPNSRSAYQRSKGIGEALVREAGRRHVEHENWYLNGPKFIHGYGLNVTVFRP
HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEEECC
SVIFGRGDSFLSMFARLLKRFPVLPLGSGDARFAPVHVEDVARAFADSLDNVATFGETYE
EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHH
LCGPRAYTLQELVSYVGEVTGKPRRIVPLGKWPSYFQAWALEFKPGKKLMTRDNYYAMGT
HCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHEEEECCCCCEEECCCEEEECC
DNVCAAGWPAVFGFEPGSLEAIAPEYLRADTPRARYEDYRETARR
CCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]