| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is tusE [H]
Identifier: 74318345
GI number: 74318345
Start: 2401413
End: 2401748
Strand: Reverse
Name: tusE [H]
Synonym: Tbd_2327
Alternate gene names: 74318345
Gene position: 2401748-2401413 (Counterclockwise)
Preceding gene: 74318348
Following gene: 74318344
Centisome position: 82.54
GC content: 61.01
Gene sequence:
>336_bases ATGAACCAGATTTCTGATGCCGCAGTGATGCCCGAGCGCGATGCTGAGGGTTATCTGATCGAGCCGGGTGACTGGAACGA AGACGTCGCCCGCCTGCTCGCCGCCGACGAGAACATCGAACTCAACGACGATCATTGGGACGCGATCAACTTCATGCGCG AGTACTATGAGGAGCATCAGGTCGCGGCCGACGCCCGCTTCGTGATCAAACACCTCGCCGAGCGCCTCGGCAAGGACGCG CAGAAAAAGTTGTTCGAGTTGTTTCCCTACGGCTACGTCAAGCAGGCCTGCAAAATCGCCGGCATGCGCCGGCCCCGGGC CTGGAGCACGGGCTGA
Upstream 100 bases:
>100_bases TATCGCTTTTTTCGATATCAAAAACCAAAAATAATCGCTGGATAGATGGGTGCCCGATCCTTAAGCTGTAGGCAACAGCA ACGAGGACGAAGGACACAGC
Downstream 100 bases:
>100_bases ACCCGAAGCGTACGCCTCATTCCGTCGGAGTCGCGTAACCCTGACGGTCGGCGCCCCGCCTCAGGGGCAGCCCGAGTCGC GGGCCGGCATTTTCAGGTGG
Product: putative sulfite reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MNQISDAAVMPERDAEGYLIEPGDWNEDVARLLAADENIELNDDHWDAINFMREYYEEHQVAADARFVIKHLAERLGKDA QKKLFELFPYGYVKQACKIAGMRRPRAWSTG
Sequences:
>Translated_111_residues MNQISDAAVMPERDAEGYLIEPGDWNEDVARLLAADENIELNDDHWDAINFMREYYEEHQVAADARFVIKHLAERLGKDA QKKLFELFPYGYVKQACKIAGMRRPRAWSTG >Mature_111_residues MNQISDAAVMPERDAEGYLIEPGDWNEDVARLLAADENIELNDDHWDAINFMREYYEEHQVAADARFVIKHLAERLGKDA QKKLFELFPYGYVKQACKIAGMRRPRAWSTG
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG2920
COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrC/tusE family [H]
Homologues:
Organism=Escherichia coli, GI87081811, Length=96, Percent_Identity=39.5833333333333, Blast_Score=84, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007453 [H]
Pfam domain/function: PF04358 DsrC [H]
EC number: NA
Molecular weight: Translated: 12846; Mature: 12846
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQISDAAVMPERDAEGYLIEPGDWNEDVARLLAADENIELNDDHWDAINFMREYYEEHQ CCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VAADARFVIKHLAERLGKDAQKKLFELFPYGYVKQACKIAGMRRPRAWSTG HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNQISDAAVMPERDAEGYLIEPGDWNEDVARLLAADENIELNDDHWDAINFMREYYEEHQ CCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VAADARFVIKHLAERLGKDAQKKLFELFPYGYVKQACKIAGMRRPRAWSTG HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]