| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is phnH [H]
Identifier: 74318313
GI number: 74318313
Start: 2369350
End: 2369931
Strand: Reverse
Name: phnH [H]
Synonym: Tbd_2295
Alternate gene names: 74318313
Gene position: 2369931-2369350 (Counterclockwise)
Preceding gene: 74318314
Following gene: 74318312
Centisome position: 81.45
GC content: 72.16
Gene sequence:
>582_bases ATGAAGCATGAATGCATCTGGCTGGCCGACGTCCAGCAGCGCGTGTTCCGCGAACTGGTCGAGGCGTTTTCGCGGCCGGG CGAGGTGCGCGATTTGACGCCATGGCTTGACGGCGCCACCGCGCAACGCGCCGTACTGGCCACGCTGATGGATGGCGAGA CCACGCTCGCCGACCCCCATGCACGGCTCGGCGCGGCGGACTGGCCCCTGCTCCAGGCCCGGATCGGCACGGCGGAAGAC GCGCGCTACGTCGTCGCCGACGGCCGCCGCGCGCCCGGTTTCGAGCCGGCGCTGGGCACGCTGGAAAGCCCGGAATCGGG CGCGACCCTGCTGATTGAGGTGGCGGCAGTGGGCAGCGGCCCGCTGGCCCTGGAACTCGCCGGGCCTGGAATTGATGGTC CGGGCATCGACGGCCGGCGCGAACTGCGCCTCGACGGCCTGCATCCCGACTGGCTGCTGCGCCGCGCCGACTGGACCGCC GGCTTTCCGCTCGGCGTCGACATCCTGTTCACCGACGCGACGCGCATCGTCGCCTTGCCGCGCACCACGCGCGCGGCCCC CATGGGGAACCCGCCGACATGA
Upstream 100 bases:
>100_bases GGCGCCCGCCTGCGTGCCGAAGCAGACCGCCGCCGTCGCGCCATGCTCGCCGCGACCCGCGTCGACTTCGCCCTGCTGGG CAACACCGGGGAGGACGATG
Downstream 100 bases:
>100_bases GTTACGTTGCCATCAAGGGCGGCGGGCGCGCCATCGCCGGCGCCGCCGCCGTGACCGAATATCTGCGCACCGAGGAAGGG CTGGGCAATCCCGATGCCGA
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKHECIWLADVQQRVFRELVEAFSRPGEVRDLTPWLDGATAQRAVLATLMDGETTLADPHARLGAADWPLLQARIGTAED ARYVVADGRRAPGFEPALGTLESPESGATLLIEVAAVGSGPLALELAGPGIDGPGIDGRRELRLDGLHPDWLLRRADWTA GFPLGVDILFTDATRIVALPRTTRAAPMGNPPT
Sequences:
>Translated_193_residues MKHECIWLADVQQRVFRELVEAFSRPGEVRDLTPWLDGATAQRAVLATLMDGETTLADPHARLGAADWPLLQARIGTAED ARYVVADGRRAPGFEPALGTLESPESGATLLIEVAAVGSGPLALELAGPGIDGPGIDGRRELRLDGLHPDWLLRRADWTA GFPLGVDILFTDATRIVALPRTTRAAPMGNPPT >Mature_193_residues MKHECIWLADVQQRVFRELVEAFSRPGEVRDLTPWLDGATAQRAVLATLMDGETTLADPHARLGAADWPLLQARIGTAED ARYVVADGRRAPGFEPALGTLESPESGATLLIEVAAVGSGPLALELAGPGIDGPGIDGRRELRLDGLHPDWLLRRADWTA GFPLGVDILFTDATRIVALPRTTRAAPMGNPPT
Specific function: Belongs to an operon involved in hypophosphite oxidation. Exact function not known [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 20688; Mature: 20688
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHECIWLADVQQRVFRELVEAFSRPGEVRDLTPWLDGATAQRAVLATLMDGETTLADPH CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCH ARLGAADWPLLQARIGTAEDARYVVADGRRAPGFEPALGTLESPESGATLLIEVAAVGSG HHCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC PLALELAGPGIDGPGIDGRRELRLDGLHPDWLLRRADWTAGFPLGVDILFTDATRIVALP CEEEEEECCCCCCCCCCCCEEEEECCCCHHHHEEECCCCCCCCCCEEEEEECCEEEEEEC RTTRAAPMGNPPT CCCCCCCCCCCCC >Mature Secondary Structure MKHECIWLADVQQRVFRELVEAFSRPGEVRDLTPWLDGATAQRAVLATLMDGETTLADPH CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCH ARLGAADWPLLQARIGTAEDARYVVADGRRAPGFEPALGTLESPESGATLLIEVAAVGSG HHCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC PLALELAGPGIDGPGIDGRRELRLDGLHPDWLLRRADWTAGFPLGVDILFTDATRIVALP CEEEEEECCCCCCCCCCCCEEEEECCCCHHHHEEECCCCCCCCCCEEEEEECCEEEEEEC RTTRAAPMGNPPT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]