Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318259

Identifier: 74318259

GI number: 74318259

Start: 2317111

End: 2317524

Strand: Direct

Name: 74318259

Synonym: Tbd_2241

Alternate gene names: NA

Gene position: 2317111-2317524 (Clockwise)

Preceding gene: 74318258

Following gene: 74318260

Centisome position: 79.63

GC content: 64.25

Gene sequence:

>414_bases
ATGTTGCCACCGCTCGTGCGCGCGATGCTCGAGGAGCCCGGCCTGTTCACCGGGTACGTCAAAGCCTACGCCGTGTTGTT
CAAACAGGACGCGGCATGGTGGCGAACCAAGCAGGTGCGCCGCCTGGTGAATCTCGCCGCCCTCGTCGGCGGCGGATTTT
TCGCCGTGCTGTTCGGCGGCGTGGCGTTGATGATGTTCGCCGTGACCGGCGTGGCCCACTGGCTGTTGTGGGCCGTCCCC
GTCGCGCCCGCGCTCGTCGCACTCGTTGCAGCTTGGCGCCTGCGTCACCCGCGGCCGGAATCGGAAATATTTCCACGCGT
CCGCGAGCAGGTCGCGCAGGACATGCGCTTATTCAGCCTCAAGGAGCGGACCCATGAACCAGCCCATGAACCAAAACTAC
AACCAAGATCATGA

Upstream 100 bases:

>100_bases
TGCTGATGGCCGCGGCGGCGGGCGCGGCGATCGCGATGCTCGCCGGCCTGCTCAGCAAGAGCCACCACACGCACTGATCG
ACGACCCTAGGCGGCCTGCC

Downstream 100 bases:

>100_bases
CGCGTCCGTCGCAGCGCCGGCGTTTGGCGACGCCGAGAGCGCACTGCAGCAGAACCGCGACGTGCTGCGCCAGCGTCTGG
CACAGCGGGAGCAGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLPPLVRAMLEEPGLFTGYVKAYAVLFKQDAAWWRTKQVRRLVNLAALVGGGFFAVLFGGVALMMFAVTGVAHWLLWAVP
VAPALVALVAAWRLRHPRPESEIFPRVREQVAQDMRLFSLKERTHEPAHEPKLQPRS

Sequences:

>Translated_137_residues
MLPPLVRAMLEEPGLFTGYVKAYAVLFKQDAAWWRTKQVRRLVNLAALVGGGFFAVLFGGVALMMFAVTGVAHWLLWAVP
VAPALVALVAAWRLRHPRPESEIFPRVREQVAQDMRLFSLKERTHEPAHEPKLQPRS
>Mature_137_residues
MLPPLVRAMLEEPGLFTGYVKAYAVLFKQDAAWWRTKQVRRLVNLAALVGGGFFAVLFGGVALMMFAVTGVAHWLLWAVP
VAPALVALVAAWRLRHPRPESEIFPRVREQVAQDMRLFSLKERTHEPAHEPKLQPRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15468; Mature: 15468

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPLVRAMLEEPGLFTGYVKAYAVLFKQDAAWWRTKQVRRLVNLAALVGGGFFAVLFGG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALMMFAVTGVAHWLLWAVPVAPALVALVAAWRLRHPRPESEIFPRVREQVAQDMRLFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KERTHEPAHEPKLQPRS
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLPPLVRAMLEEPGLFTGYVKAYAVLFKQDAAWWRTKQVRRLVNLAALVGGGFFAVLFGG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALMMFAVTGVAHWLLWAVPVAPALVALVAAWRLRHPRPESEIFPRVREQVAQDMRLFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KERTHEPAHEPKLQPRS
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA