| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318163
Identifier: 74318163
GI number: 74318163
Start: 2230111
End: 2230911
Strand: Reverse
Name: 74318163
Synonym: Tbd_2145
Alternate gene names: NA
Gene position: 2230911-2230111 (Counterclockwise)
Preceding gene: 74318164
Following gene: 74318160
Centisome position: 76.67
GC content: 68.41
Gene sequence:
>801_bases ATGACGTTTCGCCGCATTCGCCTCCTCGGCGTGCTCGGCGTGCTCGTCGCGGCGGGCGTGCTCACCTGGCAGGAGCAGAG CATGGTGCGCGGCTGGCGGGCGCCGCTCGACGTGGTCGTGATTCCGATCAACGGCGACGGCTCGCACGACGCGGCGCAGA CGATCCGCGCGCTGCAGGCGAGCGACTTCGCCGACGTCGGCGCCTTCCTCGAACGCGAGGCGGCGCGCTACGGCGCGCAG CTGTCACCCGCCGTGCAGCTCCGCCTGCTTCCGGAACTGCATGCCAAGCCGCCCACGCCACCGCCGGACGGCAACCTGTT GAAGACCATGTGGTGGAGCCTCTCGCTGCGCTGGTGGGCCTACCGCCACGCCGGCGGAGGGCTGCCGCAGCTCGGCACGA TCCGCTTGTTCGTGCTCTATCACACGCCCGAGGAAGGCATCGCGCTGGCGCACTCGCTCGGCATCCAGAAGGGCTTGATC GGGGTCGTCCACGCTTTCGCCGATCCCCGACAGACGCGGCAGAACAACATCGTCCTTGCCCATGAACTGCTGCACACGCT CGGCGCCAGCGACAAGTACGACGCCGAAGGCAGGCCCGTCTACCCGCAAGGCTACGCCGATCCTGATCTCCCTGCGCTGC AGCCGCGGCTGCGCGCGGAGATCATGGCGGGACGACTGGTGAATGGGTCGGGCCGGGTAGTCATGCCGGAGAGCCTCGAA CAATGCGTGATCGGCGCGCTGACCGCGCACGAAATCAATCTTGATGCGGCATTCAGGCGGCGCTATTCAACCGGGCCCTG A
Upstream 100 bases:
>100_bases GCGCCCGAGGCCGCGCCTGCCGCGGCCGCGCCTTGAGTCCGGCTCAAGAACTGGACGCGGGCGCCGTCAAGGACAGACTC TCCTCTCAGCCCGCATCGCC
Downstream 100 bases:
>100_bases CGCGCGCAGCGCGCGGATGCGCGCGAGGCCGAAATGGATGAAGGCGAGCGCGGCGAATACCGGCGCGAGCAGATTGAGCA CCGGCACGAACTGGAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTFRRIRLLGVLGVLVAAGVLTWQEQSMVRGWRAPLDVVVIPINGDGSHDAAQTIRALQASDFADVGAFLEREAARYGAQ LSPAVQLRLLPELHAKPPTPPPDGNLLKTMWWSLSLRWWAYRHAGGGLPQLGTIRLFVLYHTPEEGIALAHSLGIQKGLI GVVHAFADPRQTRQNNIVLAHELLHTLGASDKYDAEGRPVYPQGYADPDLPALQPRLRAEIMAGRLVNGSGRVVMPESLE QCVIGALTAHEINLDAAFRRRYSTGP
Sequences:
>Translated_266_residues MTFRRIRLLGVLGVLVAAGVLTWQEQSMVRGWRAPLDVVVIPINGDGSHDAAQTIRALQASDFADVGAFLEREAARYGAQ LSPAVQLRLLPELHAKPPTPPPDGNLLKTMWWSLSLRWWAYRHAGGGLPQLGTIRLFVLYHTPEEGIALAHSLGIQKGLI GVVHAFADPRQTRQNNIVLAHELLHTLGASDKYDAEGRPVYPQGYADPDLPALQPRLRAEIMAGRLVNGSGRVVMPESLE QCVIGALTAHEINLDAAFRRRYSTGP >Mature_265_residues TFRRIRLLGVLGVLVAAGVLTWQEQSMVRGWRAPLDVVVIPINGDGSHDAAQTIRALQASDFADVGAFLEREAARYGAQL SPAVQLRLLPELHAKPPTPPPDGNLLKTMWWSLSLRWWAYRHAGGGLPQLGTIRLFVLYHTPEEGIALAHSLGIQKGLIG VVHAFADPRQTRQNNIVLAHELLHTLGASDKYDAEGRPVYPQGYADPDLPALQPRLRAEIMAGRLVNGSGRVVMPESLEQ CVIGALTAHEINLDAAFRRRYSTGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29131; Mature: 29000
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRRIRLLGVLGVLVAAGVLTWQEQSMVRGWRAPLDVVVIPINGDGSHDAAQTIRALQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH SDFADVGAFLEREAARYGAQLSPAVQLRLLPELHAKPPTPPPDGNLLKTMWWSLSLRWWA CCHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE YRHAGGGLPQLGTIRLFVLYHTPEEGIALAHSLGIQKGLIGVVHAFADPRQTRQNNIVLA EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEH HELLHTLGASDKYDAEGRPVYPQGYADPDLPALQPRLRAEIMAGRLVNGSGRVVMPESLE HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEECCCCCEECHHHHH QCVIGALTAHEINLDAAFRRRYSTGP HHHHHHHHHEEECCHHHHHHHCCCCC >Mature Secondary Structure TFRRIRLLGVLGVLVAAGVLTWQEQSMVRGWRAPLDVVVIPINGDGSHDAAQTIRALQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH SDFADVGAFLEREAARYGAQLSPAVQLRLLPELHAKPPTPPPDGNLLKTMWWSLSLRWWA CCHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE YRHAGGGLPQLGTIRLFVLYHTPEEGIALAHSLGIQKGLIGVVHAFADPRQTRQNNIVLA EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEH HELLHTLGASDKYDAEGRPVYPQGYADPDLPALQPRLRAEIMAGRLVNGSGRVVMPESLE HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEECCCCCEECHHHHH QCVIGALTAHEINLDAAFRRRYSTGP HHHHHHHHHEEECCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA