| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yheT [H]
Identifier: 74318155
GI number: 74318155
Start: 2222553
End: 2223530
Strand: Direct
Name: yheT [H]
Synonym: Tbd_2137
Alternate gene names: 74318155
Gene position: 2222553-2223530 (Clockwise)
Preceding gene: 74318154
Following gene: 74318156
Centisome position: 76.38
GC content: 70.86
Gene sequence:
>978_bases ATGCGCAGCGCCGGCGACCCGCCCTACCGCGCGCCGTGGTGGCTGCCCGGCGGCCATCTGCAGACGATTTACGCGAGCCT CTTCATTCGCGTGCCGCCGGTCGTCTATCGCCGCGATCGGCTCGAGCTCGCCGACGGCGACTTTCTCGACTTCGACTGGG TCGACGGCGTCGCCGGGCAGCCGGCGCTCGTGCTGTTTCACGGTCTCGAGGGCAACGCCGAAAGCCCTTACGCGCGCGAC CTGATGGCGGAGCTCGGCCGGCGCGGCTGGACCGGGGCTGTTGCGCATTTCCGCGGCTGCTCGGGCGAGGACAACCGCCT GCCGCGCGCCTATTTCGCGGGCGACAGCGCGGACATCGAACACGTGCTGCGGCACGTCAAGTCGCACCACCCCGACGCGC CACTCTATGCCGTCGGCGTCTCGCTCGGCGGCAACGCCTTGCTCAAGTGGCTGGGCGAGACGGGCGCCGCTGCAGCCGCG CTGGTCACACGGGCCGCGAGTGTTTCCGCGCCGCTCGACCTGATCGCCGCAGGCCGCGCGCTCGACCGCGGCTTCAATCG CCGCGTCTACACCGCGCGCTTTCTCGCGACACTGAAGCGCAAGGCGCTCGACAAGGCGCGGCGTTTTCCCGGCCTGCTCG ACGCATCCGCGGTCGCCGCGGCGACCACGTTCCGCGAATTCGACACGCTGGTGACCGCGCGCCTGCATGGCTTTCGCGAC GCCGACGACTACTGGCTGCGGGTCTCGGCTAAACCTTTCCTGCGAGCGATCGCAGTGCCCACGCTCGTGATCAACACGAG GAACGATCCCTTCCTGCCGCACGCGGCCTTGCCCGCCCCCGCGGAGGTCGCACCGGCGGTCACGCTCGAACAGCCCGCAG CCGGAGGCCACGTCGCCTTTCCGCAGGGCCCCTTCCCAGGCCGGCTCGGCTGGCTCACGCGTCGCCTGATGCGGCACTTC GAAGCAGGGCGCGGTTAG
Upstream 100 bases:
>100_bases TCCTCCATCACGCGTCGCCCTTGCAGGTCGGCGCGAAGGCCGGCGCCGACACGCCGCCCGTCGTATTCCACTAACCAGCG GGCTTTGCCGGCGGCCGGCA
Downstream 100 bases:
>100_bases AATCGATCCCTCTGAGATCAAGGAGCGCGCTGTGGAATACCCCAAGGAAATCTTCAAGGCCTACGACATTCGCGGCATCG TCGGCAAGACCTTCACGCCT
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRSAGDPPYRAPWWLPGGHLQTIYASLFIRVPPVVYRRDRLELADGDFLDFDWVDGVAGQPALVLFHGLEGNAESPYARD LMAELGRRGWTGAVAHFRGCSGEDNRLPRAYFAGDSADIEHVLRHVKSHHPDAPLYAVGVSLGGNALLKWLGETGAAAAA LVTRAASVSAPLDLIAAGRALDRGFNRRVYTARFLATLKRKALDKARRFPGLLDASAVAAATTFREFDTLVTARLHGFRD ADDYWLRVSAKPFLRAIAVPTLVINTRNDPFLPHAALPAPAEVAPAVTLEQPAAGGHVAFPQGPFPGRLGWLTRRLMRHF EAGRG
Sequences:
>Translated_325_residues MRSAGDPPYRAPWWLPGGHLQTIYASLFIRVPPVVYRRDRLELADGDFLDFDWVDGVAGQPALVLFHGLEGNAESPYARD LMAELGRRGWTGAVAHFRGCSGEDNRLPRAYFAGDSADIEHVLRHVKSHHPDAPLYAVGVSLGGNALLKWLGETGAAAAA LVTRAASVSAPLDLIAAGRALDRGFNRRVYTARFLATLKRKALDKARRFPGLLDASAVAAATTFREFDTLVTARLHGFRD ADDYWLRVSAKPFLRAIAVPTLVINTRNDPFLPHAALPAPAEVAPAVTLEQPAAGGHVAFPQGPFPGRLGWLTRRLMRHF EAGRG >Mature_325_residues MRSAGDPPYRAPWWLPGGHLQTIYASLFIRVPPVVYRRDRLELADGDFLDFDWVDGVAGQPALVLFHGLEGNAESPYARD LMAELGRRGWTGAVAHFRGCSGEDNRLPRAYFAGDSADIEHVLRHVKSHHPDAPLYAVGVSLGGNALLKWLGETGAAAAA LVTRAASVSAPLDLIAAGRALDRGFNRRVYTARFLATLKRKALDKARRFPGLLDASAVAAATTFREFDTLVTARLHGFRD ADDYWLRVSAKPFLRAIAVPTLVINTRNDPFLPHAALPAPAEVAPAVTLEQPAAGGHVAFPQGPFPGRLGWLTRRLMRHF EAGRG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=324, Percent_Identity=29.9382716049383, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI194578891, Length=318, Percent_Identity=31.7610062893082, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI23397659, Length=332, Percent_Identity=25, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI23397661, Length=332, Percent_Identity=25, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI269315865, Length=334, Percent_Identity=27.8443113772455, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1789752, Length=303, Percent_Identity=42.2442244224422, Blast_Score=218, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17566110, Length=318, Percent_Identity=26.1006289308176, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71985405, Length=316, Percent_Identity=25, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71985413, Length=203, Percent_Identity=27.0935960591133, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319655, Length=263, Percent_Identity=28.1368821292776, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323866, Length=268, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI281398151, Length=326, Percent_Identity=27.9141104294479, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI24652003, Length=326, Percent_Identity=27.9141104294479, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24581365, Length=332, Percent_Identity=25.6024096385542, Blast_Score=91, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 35364; Mature: 35364
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAGDPPYRAPWWLPGGHLQTIYASLFIRVPPVVYRRDRLELADGDFLDFDWVDGVAGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCCEECCCCEECCCCCCCCCCC PALVLFHGLEGNAESPYARDLMAELGRRGWTGAVAHFRGCSGEDNRLPRAYFAGDSADIE CEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCHH HVLRHVKSHHPDAPLYAVGVSLGGNALLKWLGETGAAAAALVTRAASVSAPLDLIAAGRA HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LDRGFNRRVYTARFLATLKRKALDKARRFPGLLDASAVAAATTFREFDTLVTARLHGFRD HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ADDYWLRVSAKPFLRAIAVPTLVINTRNDPFLPHAALPAPAEVAPAVTLEQPAAGGHVAF CCCEEEEECCHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCC PQGPFPGRLGWLTRRLMRHFEAGRG CCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSAGDPPYRAPWWLPGGHLQTIYASLFIRVPPVVYRRDRLELADGDFLDFDWVDGVAGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCCEECCCCEECCCCCCCCCCC PALVLFHGLEGNAESPYARDLMAELGRRGWTGAVAHFRGCSGEDNRLPRAYFAGDSADIE CEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCHH HVLRHVKSHHPDAPLYAVGVSLGGNALLKWLGETGAAAAALVTRAASVSAPLDLIAAGRA HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LDRGFNRRVYTARFLATLKRKALDKARRFPGLLDASAVAAATTFREFDTLVTARLHGFRD HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ADDYWLRVSAKPFLRAIAVPTLVINTRNDPFLPHAALPAPAEVAPAVTLEQPAAGGHVAF CCCEEEEECCHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCC PQGPFPGRLGWLTRRLMRHFEAGRG CCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]