| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is priB [C]
Identifier: 74318122
GI number: 74318122
Start: 2193661
End: 2193951
Strand: Reverse
Name: priB [C]
Synonym: Tbd_2104
Alternate gene names: 74318122
Gene position: 2193951-2193661 (Counterclockwise)
Preceding gene: 74318123
Following gene: 74318121
Centisome position: 75.4
GC content: 63.57
Gene sequence:
>291_bases GTGAACCGGCTGCTCATCAGCGGCGCCCTCATCCAGGTTGAGCCCCTGCGTTACAGCCCGGCCGGCGTGCCAATCGCGGA AGCGGTCGTTCTGCACCGCAGCACCCAGGCAGTGGCGGCGCAGACGCGGCAGGTGGAGTGCGAGTTGACGGTGCAGGCGA GCGGTGCGCTCGCCGATCAACTCGCGAAACTGCCGGCCGCGACGCAGGTGAAACTGGAAGGCGCGTTGAATCGACGCAGC GTGAACAGCCGGCAACTGATCCTGATATTGAATCGAATCGAAAAGGAATAA
Upstream 100 bases:
>100_bases ACCGCCGCCTCGCCGATGATGAAGGAAGAAAAGGCGCGCGACCTGTTGCAAGGCGCGAAGGCCGACGCTCCTGCCGAGCA GCCGGCCGCAGCCTGAGTGA
Downstream 100 bases:
>100_bases ATCATGGCACGTCCCATGGGTGGAAAATCCGGCGGCAAATTTGCCGGCAAGCGCCGCGACAGCGGCAACCGCGGTCTCTT CAAGCGTCGCAAGTTCTGCC
Product: restart primosome assembly protein PriB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELTVQASGALADQLAKLPAATQVKLEGALNRRS VNSRQLILILNRIEKE
Sequences:
>Translated_96_residues MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELTVQASGALADQLAKLPAATQVKLEGALNRRS VNSRQLILILNRIEKE >Mature_96_residues MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELTVQASGALADQLAKLPAATQVKLEGALNRRS VNSRQLILILNRIEKE
Specific function: Binds Single-Stranded DNA At The Primosome Assembly Site (Pas). During Primosome Assembly It Facilitates The Complex Formation Between Pria And Dnat. [C]
COG id: COG2965
COG function: function code L; Primosomal replication protein N
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10381; Mature: 10381
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELTVQASGALADQ CCEEEEECEEEEEECCEECCCCCCHHHHHHHCCCCHHHHHHCEEEEEEEEEEECCHHHHH LAKLPAATQVKLEGALNRRSVNSRQLILILNRIEKE HHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELTVQASGALADQ CCEEEEECEEEEEECCEECCCCCCHHHHHHHCCCCHHHHHHCEEEEEEEEEEECCHHHHH LAKLPAATQVKLEGALNRRSVNSRQLILILNRIEKE HHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA