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The map label for this gene is cc4 [H]

Identifier: 74318045

GI number: 74318045

Start: 2117614

End: 2117949

Strand: Reverse

Name: cc4 [H]

Synonym: Tbd_2027

Alternate gene names: 74318045

Gene position: 2117949-2117614 (Counterclockwise)

Preceding gene: 74318047

Following gene: 74318044

Centisome position: 72.79

GC content: 64.58

Gene sequence:

>336_bases
ATGAGAACCATCACGATGTCGCTGTGCGCGTCCGTGCTGATGGGCCTGGCCGTGCCGGCGCACGCGGCCGGCGATCCCAA
GGCCGGACAGGTCAAAACGTCAATGTGTGCCGGGTGTCACGGCATTCCGGGCTGGCGGACGGCTTATCCCAGCGTCTACA
GCGTGCCCAAACTGGGCGGACAGCACGCGGATTATATCGTGGCGGCGCTCAAGGCCTACAAGAGCGGGGAACGCAGCCAT
CCAAGCATGGTCGGCATCGCGGGCAGCCTGTCCGAGCAGGACATGCAGGATATCGCCGCCTACTATGCCTCGTCCTACAA
CGGCCCGGCCGACTAA

Upstream 100 bases:

>100_bases
CACGGTGGCACGACCCGGCCGGCCCTTCGCGCTCTATAATCGTGTCAACCCGCGCCAGACGGGGCAAGGACGATCAACCA
CCGAGGAGAGAGCGAGCAAG

Downstream 100 bases:

>100_bases
GGAGCCCTCATGAAGACACCCCTCATCATCGCCGCCGCGCTCGTCTTCGGCGTCTCGATGGCCCACGCCGGCAAGGGCAA
CGCCGCGGCAGGTAAAGCGA

Product: cytochrome c, class IC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRTITMSLCASVLMGLAVPAHAAGDPKAGQVKTSMCAGCHGIPGWRTAYPSVYSVPKLGGQHADYIVAALKAYKSGERSH
PSMVGIAGSLSEQDMQDIAAYYASSYNGPAD

Sequences:

>Translated_111_residues
MRTITMSLCASVLMGLAVPAHAAGDPKAGQVKTSMCAGCHGIPGWRTAYPSVYSVPKLGGQHADYIVAALKAYKSGERSH
PSMVGIAGSLSEQDMQDIAAYYASSYNGPAD
>Mature_111_residues
MRTITMSLCASVLMGLAVPAHAAGDPKAGQVKTSMCAGCHGIPGWRTAYPSVYSVPKLGGQHADYIVAALKAYKSGERSH
PSMVGIAGSLSEQDMQDIAAYYASSYNGPAD

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11522; Mature: 11522

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTITMSLCASVLMGLAVPAHAAGDPKAGQVKTSMCAGCHGIPGWRTAYPSVYSVPKLGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QHADYIVAALKAYKSGERSHPSMVGIAGSLSEQDMQDIAAYYASSYNGPAD
CHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTITMSLCASVLMGLAVPAHAAGDPKAGQVKTSMCAGCHGIPGWRTAYPSVYSVPKLGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
QHADYIVAALKAYKSGERSHPSMVGIAGSLSEQDMQDIAAYYASSYNGPAD
CHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]