Click here to switch to the map view.

The map label for this gene is ycbK [H]

Identifier: 74318003

GI number: 74318003

Start: 2075046

End: 2075972

Strand: Reverse

Name: ycbK [H]

Synonym: Tbd_1985

Alternate gene names: 74318003

Gene position: 2075972-2075046 (Counterclockwise)

Preceding gene: 74318004

Following gene: 74318002

Centisome position: 71.34

GC content: 65.48

Gene sequence:

>927_bases
ATGGCAAACACCTCCCACGCTGGGTTCATCACGCGGAACGCCCTGGTCGGCGTGCTCTTCGCGCTGCTCGCTGCGATCGG
CTTTTCGGCCAAGGCCATCCTGGTCAAGCTCGCTTATCTGGATCGCGTCGACGCGGTGACCTTGCTGGCGTTGCGCATGG
CGTTTTCGGCGCCGTTCTTCATCGGCGTCGCGCTGTGGGCCCGCCGCCAGCACGCGGATCCGCTCAGCCCCCGCGACCGG
GTGCTCGTGCTCGGACTGGGGCTGCTCGGCTATTACCTCTCCAGTTTTCTCGATTTCCTCGGGCTGCAATACATCTCGGC
CGGGCTCGAGCGACTGATCCTGTTCCTCTATCCGACGATGACCGTCGTCCTGTCGGCGCTCGTCTACAAGCGCGCGATCG
GCCGGACCGTCATGGTGGCGATGGGGGTGTGCTACGCGGGAATCGCGCTGGTGTTCTTCCATGACCTGGGCACGCTGCAG
GGCGGCATCGTGCTCGGGGCGTCGCTCGTATTCGCCAGCACGCTGAGCTACTCGGTCTACCTGGTCGGCGCGGGCCACGC
GATCGCGCGGATCGGTGCGGCGCGCTTCACGGCCTACGCGATGATCGTGGCAACCCTTGCGAGCCTGCTTCGGTTCGCGT
TCACCCACCCGATCGAGGCGCTCGGGCTACCGCTGCGGGTGTACGAGCTCGCCCTGGCGATGGCGATTTTCTCGACCGTG
CTGCCGGTATTCCTTCTGTCGTACGCGATCCGCCGCATCGGCTCCGGCAGCACCTCGCTGATCGGCTCGATCGGGCCGAT
CAGCACGATTCTCATGGCGTATGTGTTCCTGCAGGAAGGGCTGTCCTTGCTGCAGATCGCCGGGTCCGCACTGGTGCTCG
CGGGCGTGCTCCTCGTGAGTTTGAATAGCCGACGTACACGGGCGTAA

Upstream 100 bases:

>100_bases
TCCTCTTCTAATTTGATTTTTGTTCACGGGGCACTGCGGGTCTGACCGCATTGCATCCTGTTTGCCGACGATCCGCCGTA
GCCCTCTCAGGGTCTCGATC

Downstream 100 bases:

>100_bases
AGCGAGTGGCCCCATTGCCGGGCCGGGAGCCGTCTTGCGTTGGCCGACTGAGGCCGTCGCTGCGACGAGGCCCCAGGCCT
CCCTGGCCGCGACAGTCGTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MANTSHAGFITRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFFIGVALWARRQHADPLSPRDR
VLVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTMTVVLSALVYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQ
GGIVLGASLVFASTLSYSVYLVGAGHAIARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTV
LPVFLLSYAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVSLNSRRTRA

Sequences:

>Translated_308_residues
MANTSHAGFITRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFFIGVALWARRQHADPLSPRDR
VLVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTMTVVLSALVYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQ
GGIVLGASLVFASTLSYSVYLVGAGHAIARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTV
LPVFLLSYAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVSLNSRRTRA
>Mature_307_residues
ANTSHAGFITRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFFIGVALWARRQHADPLSPRDRV
LVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTMTVVLSALVYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQG
GIVLGASLVFASTLSYSVYLVGAGHAIARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTVL
PVFLLSYAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVSLNSRRTRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32797; Mature: 32666

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTSHAGFITRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IGVALWARRQHADPLSPRDRVLVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVLSALVYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQGGIVLGASLVFASTLSYSVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
LVGAGHAIARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTV
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH
LPVFLLSYAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVS
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSRRTRA
CCCCCCCC
>Mature Secondary Structure 
ANTSHAGFITRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IGVALWARRQHADPLSPRDRVLVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVLSALVYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQGGIVLGASLVFASTLSYSVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE
LVGAGHAIARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTV
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHH
LPVFLLSYAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVS
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSRRTRA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]