| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317985
Identifier: 74317985
GI number: 74317985
Start: 2058972
End: 2059820
Strand: Reverse
Name: 74317985
Synonym: Tbd_1967
Alternate gene names: NA
Gene position: 2059820-2058972 (Counterclockwise)
Preceding gene: 74317986
Following gene: 74317984
Centisome position: 70.79
GC content: 58.78
Gene sequence:
>849_bases ATGGCACGCCCTTTAAGACTTGAATTGGCCGGAGGCCTTTACCACATCACCTCGCGCGGCGACGGTCGGGAAGACATTTA CCGAACCGACACAGACCGGACTACATGGCTGATGGTGGTGGGACAGGTTTGCCAGCGCTTCAACTGGGTGTGCCACGCCT GGTGCCAGATGGACAATCACTACCACCTGCTGATCGAGACGCCCGAAGCCAATCTGTCCAAGGGGATGCGGCAGCTCAAT GGCGTGTATACGCAAAGCTTCAACCGCGCGCACGGCCGGGTGGGGCATGTGTTCCAGGGGCGCTACAAGGCCATCCTGGT TGAACGGGACAGCTATCTGCTGGAACTGGCCCGTTACATTGTGCTGAACCCACTGCGTGCCGGGATGGTGAAAAAACTTG AAGCCTGGCCCTGGAGTAGTTATTTCGCCACCTGCGGCCAGGCAGATGCGCCGGATTGGTTACGCACCGACTGGATTCTT GCGCAATTCGGGCGGCAGCGGTCCGGGGCGATTCGCAAATACGTTGAGTTTGTGCATCAAGGTGCGCGGCTGCCGAGCGT GTGGGCGCAACTGCAGGGGCAGATTTATCTGGGATCGGAAAGCTTCGTCCGGAACATGCAGGCGCTTATCGAGAAGAAGC CGGCGCTGGATGAAATTCCGCGTGCCCAGCGTCGTGCGTTGACGCAACCGTTGGCGGATTTCGAGCGACGCCACGATCGC AACGAGGCGATAGCGCGCGCATATTTGTCTGGACAGCATACGATGGCAGCAATCGCTGCTCATTTTGGCGTTCACTACAC AACCGTGAGCCGGCTGGTGAAGGCTTATGAAAAAACGGCGGGAGGTTGA
Upstream 100 bases:
>100_bases CTGCCCGGTCTGGTGCCCGGGCTGACGGTGATGCCCTTGCACAACACGCACCCGGGGTCAGGTCTTTCATTATCACACTC CTAATGCCATACTCAGGCCC
Downstream 100 bases:
>100_bases TGTGATAATGAAAGACCTGACCCCGAAGCACCGGCCCGTGTTCAGGTAGCTCTCGGGCATAGCCACGAAGGATTGCATCA CCGCCTCGGCAAGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNHYHLLIETPEANLSKGMRQLN GVYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYIVLNPLRAGMVKKLEAWPWSSYFATCGQADAPDWLRTDWIL AQFGRQRSGAIRKYVEFVHQGARLPSVWAQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDR NEAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG
Sequences:
>Translated_282_residues MARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNHYHLLIETPEANLSKGMRQLN GVYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYIVLNPLRAGMVKKLEAWPWSSYFATCGQADAPDWLRTDWIL AQFGRQRSGAIRKYVEFVHQGARLPSVWAQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDR NEAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG >Mature_281_residues ARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNHYHLLIETPEANLSKGMRQLNG VYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYIVLNPLRAGMVKKLEAWPWSSYFATCGQADAPDWLRTDWILA QFGRQRSGAIRKYVEFVHQGARLPSVWAQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDRN EAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32363; Mature: 32232
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNH CCCCEEEEECCCEEEECCCCCCHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC YHLLIETPEANLSKGMRQLNGVYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYI EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECHHHHHHHHHHH VLNPLRAGMVKKLEAWPWSSYFATCGQADAPDWLRTDWILAQFGRQRSGAIRKYVEFVHQ HHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC GARLPSVWAQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDR CCCCHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCH NEAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNH CCCEEEEECCCEEEECCCCCCHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC YHLLIETPEANLSKGMRQLNGVYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYI EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECHHHHHHHHHHH VLNPLRAGMVKKLEAWPWSSYFATCGQADAPDWLRTDWILAQFGRQRSGAIRKYVEFVHQ HHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC GARLPSVWAQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDR CCCCHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCH NEAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA