| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317958
Identifier: 74317958
GI number: 74317958
Start: 2033998
End: 2034924
Strand: Reverse
Name: 74317958
Synonym: Tbd_1940
Alternate gene names: NA
Gene position: 2034924-2033998 (Counterclockwise)
Preceding gene: 74317959
Following gene: 74317954
Centisome position: 69.93
GC content: 63.97
Gene sequence:
>927_bases ATGGCGGCAACAGACACGCACAACTTCGCCGTTTTCTGCGATTTCGAAAACGTCGCGATCGGCCTCAAGGAAGGCAATTA CCCGGATTTCAAGATACGCCCGGTGCTCGAACGCCTGCTTCTCAAGGGCAGCATCGTCGTCAAGAAAGCGTATTGCGACT GGGACCGCTACAAGGAATACAAGCGCGACATGCACGAAGCCGCGTTCGAGCTGATCGAGATCCCGCACGTGCGCCAGTCG GGCAAGAACTCGGCCGACATCCGCATGGTCGTCGACGCGCTCGACCTCTGCTACACCAAGGCGCACATCGACGCCTTCGT CATCATCAGTGGCGATTCCGATTTCTCGCCGCTCATCTCCAAGCTCAAGGAGAACGGCAAGAGCGTGATCGGTATCGGCG TGCGTGGCTCGGCGTCGTCGCTCCTGATCAGCAACTGCGACGAGTTCATCTTTTACGAAGATCTTGTGCAGCCCAAGGCC CGGCCCACGCGGCCGGCGAAGAAGGCGCCGAGCGAGAAAGTCGCTGTTCCGCCGCAGCCCGCGAAGGAGGTGGAGACGGG CGCGGCGGCCAAACCAGCGACGACGACCCGCCGGCGCGGACGTCCCGCTGTCGCGCAGGCTGCCGATGCCGTCGAGGCTG CGCCGGCCGCCGAGCCGACGCCCGAAGAACAGAAAACCCGGGCGATCGAAATCGTCGTCGGCACGCTCGAACAACTGGTC GCCGAGCGCGGCGAAGGCGCGATCTCGGCCTCGCTGATCAAGAACACGATCAAGCGCATCCAGCCCGGCTTCAGCGAGTC GCAGTACGGCTACAGCGCGTTCGGAAAGATCCTCGACGACGCGCACAAGCGCGGCGCCCTCGTGGTGGACAAGAAAGAGG GCGGCGCGGTCCTGGTAAGCCTGCCGCCTGCCCGGGGCGAGTCCTGA
Upstream 100 bases:
>100_bases TTCCCGGTTAGCATGAGGCGCTCGAGCGGCCGTTTCGCCACGCCCGGTGTGCGGGCGCAGCGACATGGCGCACCCAGACA CACATCGAGGGAGCCCCGAC
Downstream 100 bases:
>100_bases GCACCTCGACCGATCGGCTGCAGTCGGCGTGCCGGCCGCCCGCCGCCGCGCCGGCGTCTACAGGCCGAGTAGTTCCGCAT GCACGCCCTGGGACTGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MAATDTHNFAVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYCDWDRYKEYKRDMHEAAFELIEIPHVRQS GKNSADIRMVVDALDLCYTKAHIDAFVIISGDSDFSPLISKLKENGKSVIGIGVRGSASSLLISNCDEFIFYEDLVQPKA RPTRPAKKAPSEKVAVPPQPAKEVETGAAAKPATTTRRRGRPAVAQAADAVEAAPAAEPTPEEQKTRAIEIVVGTLEQLV AERGEGAISASLIKNTIKRIQPGFSESQYGYSAFGKILDDAHKRGALVVDKKEGGAVLVSLPPARGES
Sequences:
>Translated_308_residues MAATDTHNFAVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYCDWDRYKEYKRDMHEAAFELIEIPHVRQS GKNSADIRMVVDALDLCYTKAHIDAFVIISGDSDFSPLISKLKENGKSVIGIGVRGSASSLLISNCDEFIFYEDLVQPKA RPTRPAKKAPSEKVAVPPQPAKEVETGAAAKPATTTRRRGRPAVAQAADAVEAAPAAEPTPEEQKTRAIEIVVGTLEQLV AERGEGAISASLIKNTIKRIQPGFSESQYGYSAFGKILDDAHKRGALVVDKKEGGAVLVSLPPARGES >Mature_307_residues AATDTHNFAVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYCDWDRYKEYKRDMHEAAFELIEIPHVRQSG KNSADIRMVVDALDLCYTKAHIDAFVIISGDSDFSPLISKLKENGKSVIGIGVRGSASSLLISNCDEFIFYEDLVQPKAR PTRPAKKAPSEKVAVPPQPAKEVETGAAAKPATTTRRRGRPAVAQAADAVEAAPAAEPTPEEQKTRAIEIVVGTLEQLVA ERGEGAISASLIKNTIKRIQPGFSESQYGYSAFGKILDDAHKRGALVVDKKEGGAVLVSLPPARGES
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33419; Mature: 33288
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATDTHNFAVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYCDWDRYKEY CCCCCCCCEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHCCCEEEEEHHCCHHHHHHH KRDMHEAAFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSDFSPLIS HHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH KLKENGKSVIGIGVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKKAPSEKVAVPPQP HHHHCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC AKEVETGAAAKPATTTRRRGRPAVAQAADAVEAAPAAEPTPEEQKTRAIEIVVGTLEQLV HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AERGEGAISASLIKNTIKRIQPGFSESQYGYSAFGKILDDAHKRGALVVDKKEGGAVLVS HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEE LPPARGES CCCCCCCC >Mature Secondary Structure AATDTHNFAVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYCDWDRYKEY CCCCCCCEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHCCCEEEEEHHCCHHHHHHH KRDMHEAAFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSDFSPLIS HHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH KLKENGKSVIGIGVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKKAPSEKVAVPPQP HHHHCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC AKEVETGAAAKPATTTRRRGRPAVAQAADAVEAAPAAEPTPEEQKTRAIEIVVGTLEQLV HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AERGEGAISASLIKNTIKRIQPGFSESQYGYSAFGKILDDAHKRGALVVDKKEGGAVLVS HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEE LPPARGES CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA