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The map label for this gene is yuxH [H]

Identifier: 74317956

GI number: 74317956

Start: 2031840

End: 2033108

Strand: Direct

Name: yuxH [H]

Synonym: Tbd_1938

Alternate gene names: 74317956

Gene position: 2031840-2033108 (Clockwise)

Preceding gene: 74317955

Following gene: 74317957

Centisome position: 69.83

GC content: 66.04

Gene sequence:

>1269_bases
TTGGGTAAGGAAACCTTTCTCGCGAGGCAACCCATCGTCGACGCCGCACACGGCCTCTTCGCTTACGAGCTGCTGTTCAG
GCAGTCGCTGAATTCCGTCTCCGCCCAGATCGGCAGCCAGCTCCAGGCCGGCGTCGAGGTCATCAGCAACACCCTCTGTC
TCGGGCCGGAGTGGCTGCTGCAGGGCAAGCTCGCCTTCATCAATCTCGACGAAGCGACGCTGATGAGCGACTTCGTCTGC
CTGCTTCCGCCGCATCACGTCGTCTACGAAATCCTCGAGACCGTGCCGATGTCGGCGGTGCTGGTCGCCCGCATCCGCGA
GCTCAAGCAGCTCGGCTACCGCTTCGCGCTCGACGATTTCGTCTGCCTCGAGGAATATCGCCCGCTGTTGCCGATGGTGG
ACTTCGTCAAGCTCGACGTGCTCGAACAGCATGCGGAAAAGACCGTCGAGATCATCGCGCACATCCGGCTCAACTTCCGC
GGCCAGTTCATCGCCGAGAAGGTCGAAAGCCGCGAGATGTTCGAGCTCTGCCGCGACGCCGGCATCGAGTATTTCCAGGG
TTATTATTTCGCCCGCCCGGAGAACTTCTCGAGCAAGACCATCCAGCCCGGACAACTTGCGGTGCTCGACCTGATGAACC
AGGTTCGCGCGTGCGACGACCTCGGCGAGATCGAGGAGCCTTTGCGGCGCAACGCCGCGCTGACGCTGCGCCTGCTGCGC
TACGCCAATTCGGCGGCGTCGGGCGTGCGCCAGCCGGTTCACACGGTGCGCCAGGCGCTGACGCTCGTCGGACTGAGGAC
GCTCTACCGCTGGCTCGCGCTGCTCCTCGTCGTCGCCAACCCGAGCCCGACTAACCTCCTGCTCGCCCGCACCGCCGTGA
CCCGCGGACGCGTCTGCGAGCTGCTCGGCCAGCCGCGCCTCGACCGCGACGCACAGGACGAACTCTTCATCACCGGCTTG
TTTTCGCTCGCGGGCCCACTCATGGGCACGCCGCTGCCCGACCTGCTCGCGCGTCTGCCGATGCCCGACGCGATCGTGCA
GGCGCTGCTCGATCGCAGCGGTCCCTACGCACCTTTCCTCGCGCTCGCCGAAGCGTCGGAGCGCAACGATTTCGAGGCGA
TCGCGCGGTACGCGGGCGAGATCGCGTGCCCACCCGAGGAGATCACCGTCGTCGAATTGCAGTCGCTCGCGTGGACGGAG
GCGCTGAGCACGGAAATGGCAGAAGACGCCGCCGCACCGGCTCGCACGCGCAGCGACACGCGCGCCTGA

Upstream 100 bases:

>100_bases
GCCCGCGCTCGCGCACGGGGCCGCGCTCAGCGCCGCTTGGAACCGGAAACCGAACTGATATGCTCCTCCCCGATGACAAA
ACAATCAGGAGGAGCCCGGT

Downstream 100 bases:

>100_bases
AGCGGCCACGCGGCCGCCGCCCGGCCCGCGGCGCCAATCGAGGGAACGATCACGGTCTGCGGAATGCGTCGCGCAGGGCC
TCGCCCACGCCGCTTACCCA

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MGKETFLARQPIVDAAHGLFAYELLFRQSLNSVSAQIGSQLQAGVEVISNTLCLGPEWLLQGKLAFINLDEATLMSDFVC
LLPPHHVVYEILETVPMSAVLVARIRELKQLGYRFALDDFVCLEEYRPLLPMVDFVKLDVLEQHAEKTVEIIAHIRLNFR
GQFIAEKVESREMFELCRDAGIEYFQGYYFARPENFSSKTIQPGQLAVLDLMNQVRACDDLGEIEEPLRRNAALTLRLLR
YANSAASGVRQPVHTVRQALTLVGLRTLYRWLALLLVVANPSPTNLLLARTAVTRGRVCELLGQPRLDRDAQDELFITGL
FSLAGPLMGTPLPDLLARLPMPDAIVQALLDRSGPYAPFLALAEASERNDFEAIARYAGEIACPPEEITVVELQSLAWTE
ALSTEMAEDAAAPARTRSDTRA

Sequences:

>Translated_422_residues
MGKETFLARQPIVDAAHGLFAYELLFRQSLNSVSAQIGSQLQAGVEVISNTLCLGPEWLLQGKLAFINLDEATLMSDFVC
LLPPHHVVYEILETVPMSAVLVARIRELKQLGYRFALDDFVCLEEYRPLLPMVDFVKLDVLEQHAEKTVEIIAHIRLNFR
GQFIAEKVESREMFELCRDAGIEYFQGYYFARPENFSSKTIQPGQLAVLDLMNQVRACDDLGEIEEPLRRNAALTLRLLR
YANSAASGVRQPVHTVRQALTLVGLRTLYRWLALLLVVANPSPTNLLLARTAVTRGRVCELLGQPRLDRDAQDELFITGL
FSLAGPLMGTPLPDLLARLPMPDAIVQALLDRSGPYAPFLALAEASERNDFEAIARYAGEIACPPEEITVVELQSLAWTE
ALSTEMAEDAAAPARTRSDTRA
>Mature_421_residues
GKETFLARQPIVDAAHGLFAYELLFRQSLNSVSAQIGSQLQAGVEVISNTLCLGPEWLLQGKLAFINLDEATLMSDFVCL
LPPHHVVYEILETVPMSAVLVARIRELKQLGYRFALDDFVCLEEYRPLLPMVDFVKLDVLEQHAEKTVEIIAHIRLNFRG
QFIAEKVESREMFELCRDAGIEYFQGYYFARPENFSSKTIQPGQLAVLDLMNQVRACDDLGEIEEPLRRNAALTLRLLRY
ANSAASGVRQPVHTVRQALTLVGLRTLYRWLALLLVVANPSPTNLLLARTAVTRGRVCELLGQPRLDRDAQDELFITGLF
SLAGPLMGTPLPDLLARLPMPDAIVQALLDRSGPYAPFLALAEASERNDFEAIARYAGEIACPPEEITVVELQSLAWTEA
LSTEMAEDAAAPARTRSDTRA

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46979; Mature: 46848

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKETFLARQPIVDAAHGLFAYELLFRQSLNSVSAQIGSQLQAGVEVISNTLCLGPEWLL
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QGKLAFINLDEATLMSDFVCLLPPHHVVYEILETVPMSAVLVARIRELKQLGYRFALDDF
CCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VCLEEYRPLLPMVDFVKLDVLEQHAEKTVEIIAHIRLNFRGQFIAEKVESREMFELCRDA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GIEYFQGYYFARPENFSSKTIQPGQLAVLDLMNQVRACDDLGEIEEPLRRNAALTLRLLR
CHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YANSAASGVRQPVHTVRQALTLVGLRTLYRWLALLLVVANPSPTNLLLARTAVTRGRVCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
LLGQPRLDRDAQDELFITGLFSLAGPLMGTPLPDLLARLPMPDAIVQALLDRSGPYAPFL
HHCCCCCCCCCCHHHHHHHHHHHHCHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
ALAEASERNDFEAIARYAGEIACPPEEITVVELQSLAWTEALSTEMAEDAAAPARTRSDT
HHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RA
CC
>Mature Secondary Structure 
GKETFLARQPIVDAAHGLFAYELLFRQSLNSVSAQIGSQLQAGVEVISNTLCLGPEWLL
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QGKLAFINLDEATLMSDFVCLLPPHHVVYEILETVPMSAVLVARIRELKQLGYRFALDDF
CCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VCLEEYRPLLPMVDFVKLDVLEQHAEKTVEIIAHIRLNFRGQFIAEKVESREMFELCRDA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GIEYFQGYYFARPENFSSKTIQPGQLAVLDLMNQVRACDDLGEIEEPLRRNAALTLRLLR
CHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YANSAASGVRQPVHTVRQALTLVGLRTLYRWLALLLVVANPSPTNLLLARTAVTRGRVCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
LLGQPRLDRDAQDELFITGLFSLAGPLMGTPLPDLLARLPMPDAIVQALLDRSGPYAPFL
HHCCCCCCCCCCHHHHHHHHHHHHCHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHH
ALAEASERNDFEAIARYAGEIACPPEEITVVELQSLAWTEALSTEMAEDAAAPARTRSDT
HHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]