| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317952
Identifier: 74317952
GI number: 74317952
Start: 2029676
End: 2030140
Strand: Direct
Name: 74317952
Synonym: Tbd_1934
Alternate gene names: NA
Gene position: 2029676-2030140 (Clockwise)
Preceding gene: 74317951
Following gene: 74317955
Centisome position: 69.75
GC content: 66.88
Gene sequence:
>465_bases GTGGAATACATCGTCGTCAAGTGGCTGCACATCCTGTCGTCGACCTTCCTGTTCGGCACCGGCATCGGCTCGGCCTTCTA TCTCTTTTTTGCGAGCCTCAAGCGCGAGCCGCTCGCCGTCGCCTTTGTCGCCCGCCACGTCGTCAAGGCCGACTGGCTGT TCACCGCGACGACCGTCGTGTTCCAGCCGGCGAGCGGCTTCTATCTGGCCTACCTTGCGGACATCCCGCTCGGCAGCATG TGGATCGCGGGGTCGACCGCGCTCTACCTCTTTGCGGTCGGCTGCTGGCTCCCGGTCGCGCGCCTGCAGTACCGCATGCG CGACGCCGCGCGGCGGGCGGTCCAAGACGGCGCTGACCTGCCGCCGGACTACTGGCGCGCCTTCCGCATGTGGATCGCGC TGGGCTTCCCGGCGCTGTTCGCGTTCGTCGCGATCTTCTACCTCATGGTCGCGAAGCCCGTGTGA
Upstream 100 bases:
>100_bases ACCTGCCCGAATTCTGGGCCCACCCCTACGGCCCGATCCTCAAGAACCTGCCGCTGCTCGCGGCGATCTGGGTGCTCTAT GCGCTCGAGAAGGACTGAAC
Downstream 100 bases:
>100_bases ACGTCCGACCCGTGCAAGACGCGGGAAAAATCTGCACGGAGATTTGCACGGCTTACGCGAAGGCGTACCCGAGCCTGCGC ACGTCGTGCGGGTCCTCAGG
Product: integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MEYIVVKWLHILSSTFLFGTGIGSAFYLFFASLKREPLAVAFVARHVVKADWLFTATTVVFQPASGFYLAYLADIPLGSM WIAGSTALYLFAVGCWLPVARLQYRMRDAARRAVQDGADLPPDYWRAFRMWIALGFPALFAFVAIFYLMVAKPV
Sequences:
>Translated_154_residues MEYIVVKWLHILSSTFLFGTGIGSAFYLFFASLKREPLAVAFVARHVVKADWLFTATTVVFQPASGFYLAYLADIPLGSM WIAGSTALYLFAVGCWLPVARLQYRMRDAARRAVQDGADLPPDYWRAFRMWIALGFPALFAFVAIFYLMVAKPV >Mature_154_residues MEYIVVKWLHILSSTFLFGTGIGSAFYLFFASLKREPLAVAFVARHVVKADWLFTATTVVFQPASGFYLAYLADIPLGSM WIAGSTALYLFAVGCWLPVARLQYRMRDAARRAVQDGADLPPDYWRAFRMWIALGFPALFAFVAIFYLMVAKPV
Specific function: Unknown
COG id: COG5528
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17363; Mature: 17363
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYIVVKWLHILSSTFLFGTGIGSAFYLFFASLKREPLAVAFVARHVVKADWLFTATTVV CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE FQPASGFYLAYLADIPLGSMWIAGSTALYLFAVGCWLPVARLQYRMRDAARRAVQDGADL ECCCCCCEEEHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPDYWRAFRMWIALGFPALFAFVAIFYLMVAKPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEYIVVKWLHILSSTFLFGTGIGSAFYLFFASLKREPLAVAFVARHVVKADWLFTATTVV CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE FQPASGFYLAYLADIPLGSMWIAGSTALYLFAVGCWLPVARLQYRMRDAARRAVQDGADL ECCCCCCEEEHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPDYWRAFRMWIALGFPALFAFVAIFYLMVAKPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA