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The map label for this gene is yadH [H]

Identifier: 74317911

GI number: 74317911

Start: 1991654

End: 1992409

Strand: Reverse

Name: yadH [H]

Synonym: Tbd_1893

Alternate gene names: 74317911

Gene position: 1992409-1991654 (Counterclockwise)

Preceding gene: 74317912

Following gene: 74317910

Centisome position: 68.47

GC content: 62.57

Gene sequence:

>756_bases
ATGAGCGGCCTGCCTGCACTGTTCCGCAAGGAAATGCTGCGCTTCTGGAAAGTCGTCGTGCAGACCGTCGTCGCGCCGGT
GGTGACGGCGCTGCTGTACCTGTTGATTTTTTCGCACGTGCTCGAAGCGCACGTCGAGGTCTACCCGGGCGTTTCCTACA
CGAGCTTTCTGATCCCCGGGCTCGTCATGATGAGCATGCTGCAGAACGCGTTTGCCAACAGCTCGTCGAGCCTGATCCAG
TCGAAAATGACCGGCAACATCGTGTTCGTGCTGCTGCCGCCCCTGTCCTACCTGGAGTTCTTCTTGGCCTATCTCGGCGC
GTCGGTGATCCGCGGGCTCGTCGTCGGTCTCGGCGTCTGGGTCGTCACGCTCTGGTTCGCGCCGCTCGAACTGCCGCATC
TGGGCTGGCTGCTTGCCTACGCGCTGCTCGCCTGCGCGATCCTCGGTGCGGTCGGCATCCTCGCCGGGATCTGGGCCGAG
AAATACGATCAGCTCGCGGCCTTCCAGAACTTCCTGATCCTGCCGCTGACCTTTCTTTCGGGCGTGTTCTATTCGATCCA
TTCGCTGCCGCCGTTCTGGCAGGCGGTTTCCCACGTCAACCCGGTGTTCTATCTGATCGACGGCTTCCGCTATGCCTTCG
TCGGCCAGTCGGACACCGACCCCTGGCTCGGTCTGCTGGTCGCCGGGGCCTGCTTTGTGGCAATATCCGCCCTCTCCCTG
ACGCTGCTCAAGCGCGGCTACAAGCTCAGGCACTGA

Upstream 100 bases:

>100_bases
CGCTGCTCGCCGACCTGCGCGCCGACGACGTGCGCGTGCTCGAGATGCATCTGCGCGAACCCGACCTGGAAGATGTCTTC
ACCGACATCATGAAACGGAC

Downstream 100 bases:

>100_bases
AACGTCTCTCGACCGAGAGGCGCCCGATGGAAACAAGCGAAACTAGCGAGACAAGCATGGTCACTCCCGAGGACATCAAA
AGCTGGATCACGGAAAAACT

Product: ABC-2 type transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGLPALFRKEMLRFWKVVVQTVVAPVVTALLYLLIFSHVLEAHVEVYPGVSYTSFLIPGLVMMSMLQNAFANSSSSLIQ
SKMTGNIVFVLLPPLSYLEFFLAYLGASVIRGLVVGLGVWVVTLWFAPLELPHLGWLLAYALLACAILGAVGILAGIWAE
KYDQLAAFQNFLILPLTFLSGVFYSIHSLPPFWQAVSHVNPVFYLIDGFRYAFVGQSDTDPWLGLLVAGACFVAISALSL
TLLKRGYKLRH

Sequences:

>Translated_251_residues
MSGLPALFRKEMLRFWKVVVQTVVAPVVTALLYLLIFSHVLEAHVEVYPGVSYTSFLIPGLVMMSMLQNAFANSSSSLIQ
SKMTGNIVFVLLPPLSYLEFFLAYLGASVIRGLVVGLGVWVVTLWFAPLELPHLGWLLAYALLACAILGAVGILAGIWAE
KYDQLAAFQNFLILPLTFLSGVFYSIHSLPPFWQAVSHVNPVFYLIDGFRYAFVGQSDTDPWLGLLVAGACFVAISALSL
TLLKRGYKLRH
>Mature_250_residues
SGLPALFRKEMLRFWKVVVQTVVAPVVTALLYLLIFSHVLEAHVEVYPGVSYTSFLIPGLVMMSMLQNAFANSSSSLIQS
KMTGNIVFVLLPPLSYLEFFLAYLGASVIRGLVVGLGVWVVTLWFAPLELPHLGWLLAYALLACAILGAVGILAGIWAEK
YDQLAAFQNFLILPLTFLSGVFYSIHSLPPFWQAVSHVNPVFYLIDGFRYAFVGQSDTDPWLGLLVAGACFVAISALSLT
LLKRGYKLRH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=248, Percent_Identity=38.7096774193548, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27675; Mature: 27544

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCC
>Mature Secondary Structure 
SGLPALFRKEMLRFWKVVVQTVVAPVVTALLYLLIFSHVLEAHVEVYPGVSYTSFLIPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LVMMSMLQNAFANSSSSLIQSKMTGNIVFVLLPPLSYLEFFLAYLGASVIRGLVVGLGVW
HHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVTLWFAPLELPHLGWLLAYALLACAILGAVGILAGIWAEKYDQLAAFQNFLILPLTFLS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFYSIHSLPPFWQAVSHVNPVFYLIDGFRYAFVGQSDTDPWLGLLVAGACFVAISALSL
HHHHHHHCCCHHHHHHHHCCHHHHHHHCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHH
TLLKRGYKLRH
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]