Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317881

Identifier: 74317881

GI number: 74317881

Start: 1959533

End: 1960405

Strand: Reverse

Name: 74317881

Synonym: Tbd_1863

Alternate gene names: NA

Gene position: 1960405-1959533 (Counterclockwise)

Preceding gene: 74317882

Following gene: 74317880

Centisome position: 67.37

GC content: 62.08

Gene sequence:

>873_bases
ATGCTGAACCTCCGCACCCGACACCAAGCTGGCTTCGGCCTGGTCGAGCTCATGATCGGCCTCGCGGTGGGCATGATCGT
CGTGGCCGCCGCGATGAGCCTCTTGACCACCACGATGAGCAGCAGCAACGACACCATCAAGATGGGGCGGCTGGATCAGG
AGATGCGCCAGGTCATGACCATGCTTTCCCGCGACCTGCGGCGAGCGACGATCTGGGATCCAGCGGCGGAAGTCACCCGC
ATTCGCCTGACCGATCCGCTGACCTTGAGCGGCACGACCGGAACCGTGACGGTGACGAGCAGCGCCGGCAATCTCGGAGA
CATCGGAACGAAGGCAGAGGGGGGAACCCTCGTTTACAAAAACGGCACGACCGTCTATCGCGGCAGTATCACGAATTACA
ACAGCGGCAGTTTCAGCGTGACGCTCACCGGCACCTGGCCCGCCAGCGTCACCAACGCGGACGGCGTGCCGGCGACCAGT
TGGAACATCCTGCGTCCGGAATCCACCCTGATCCACACCACGAACTGCATTCTATTTGCCTCCGACACCGACGCCAGCGG
GACCTACGCCAACGGCGAGCGGCTCGGCTACCGCCTCGATACGACCGAGAACGCCGTGGAAGTCCGTACGTCTGCAAGCA
GCGGCGACACCTGCACTTCGGGCGGTAGCTGGGAAAACCTCACCGACGAAAACGTTGTCGAGATCGACGTCTTCACCGTC
ACCAACAATTCCCCTGTCACGCTCACGAGCTCGGGTTTTTCCATCGACGTGCGCGAATTCACGATCAAGATCACGGGCCA
CCTGAAAGCCGACCCCGGCGTCGAGCGGACGCTTCAGGAAACCATTCGTGTCCGCAACGACAGATTGAGCTGA

Upstream 100 bases:

>100_bases
TGGAACTCGAGTCCGCGAACGGCGTGGAGGTTTATGTGAAGGTGGGAACCGTCGGGCGTATCCGGATCTGCGTCCCCGGC
GGCGGTCAGGGGTATCCATC

Downstream 100 bases:

>100_bases
CCATGACGACATCCGGCAAGCCGTTCGTTCCCGCCAGCCAGCGCGGCATCTCCCTGATCGTCACCTTGATGATCGTGATC
CTGCTGAGCCTGCTCGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLNLRTRHQAGFGLVELMIGLAVGMIVVAAAMSLLTTTMSSSNDTIKMGRLDQEMRQVMTMLSRDLRRATIWDPAAEVTR
IRLTDPLTLSGTTGTVTVTSSAGNLGDIGTKAEGGTLVYKNGTTVYRGSITNYNSGSFSVTLTGTWPASVTNADGVPATS
WNILRPESTLIHTTNCILFASDTDASGTYANGERLGYRLDTTENAVEVRTSASSGDTCTSGGSWENLTDENVVEIDVFTV
TNNSPVTLTSSGFSIDVREFTIKITGHLKADPGVERTLQETIRVRNDRLS

Sequences:

>Translated_290_residues
MLNLRTRHQAGFGLVELMIGLAVGMIVVAAAMSLLTTTMSSSNDTIKMGRLDQEMRQVMTMLSRDLRRATIWDPAAEVTR
IRLTDPLTLSGTTGTVTVTSSAGNLGDIGTKAEGGTLVYKNGTTVYRGSITNYNSGSFSVTLTGTWPASVTNADGVPATS
WNILRPESTLIHTTNCILFASDTDASGTYANGERLGYRLDTTENAVEVRTSASSGDTCTSGGSWENLTDENVVEIDVFTV
TNNSPVTLTSSGFSIDVREFTIKITGHLKADPGVERTLQETIRVRNDRLS
>Mature_290_residues
MLNLRTRHQAGFGLVELMIGLAVGMIVVAAAMSLLTTTMSSSNDTIKMGRLDQEMRQVMTMLSRDLRRATIWDPAAEVTR
IRLTDPLTLSGTTGTVTVTSSAGNLGDIGTKAEGGTLVYKNGTTVYRGSITNYNSGSFSVTLTGTWPASVTNADGVPATS
WNILRPESTLIHTTNCILFASDTDASGTYANGERLGYRLDTTENAVEVRTSASSGDTCTSGGSWENLTDENVVEIDVFTV
TNNSPVTLTSSGFSIDVREFTIKITGHLKADPGVERTLQETIRVRNDRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31089; Mature: 31089

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLRTRHQAGFGLVELMIGLAVGMIVVAAAMSLLTTTMSSSNDTIKMGRLDQEMRQVMT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
MLSRDLRRATIWDPAAEVTRIRLTDPLTLSGTTGTVTVTSSAGNLGDIGTKAEGGTLVYK
HHHHHHHHCCCCCCCHHEEEEEECCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE
NGTTVYRGSITNYNSGSFSVTLTGTWPASVTNADGVPATSWNILRPESTLIHTTNCILFA
CCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
SDTDASGTYANGERLGYRLDTTENAVEVRTSASSGDTCTSGGSWENLTDENVVEIDVFTV
CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
TNNSPVTLTSSGFSIDVREFTIKITGHLKADPGVERTLQETIRVRNDRLS
ECCCCEEEECCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNLRTRHQAGFGLVELMIGLAVGMIVVAAAMSLLTTTMSSSNDTIKMGRLDQEMRQVMT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
MLSRDLRRATIWDPAAEVTRIRLTDPLTLSGTTGTVTVTSSAGNLGDIGTKAEGGTLVYK
HHHHHHHHCCCCCCCHHEEEEEECCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE
NGTTVYRGSITNYNSGSFSVTLTGTWPASVTNADGVPATSWNILRPESTLIHTTNCILFA
CCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
SDTDASGTYANGERLGYRLDTTENAVEVRTSASSGDTCTSGGSWENLTDENVVEIDVFTV
CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
TNNSPVTLTSSGFSIDVREFTIKITGHLKADPGVERTLQETIRVRNDRLS
ECCCCEEEECCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA