| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mviN [H]
Identifier: 74317873
GI number: 74317873
Start: 1948083
End: 1949621
Strand: Direct
Name: mviN [H]
Synonym: Tbd_1855
Alternate gene names: 74317873
Gene position: 1948083-1949621 (Clockwise)
Preceding gene: 74317871
Following gene: 74317874
Centisome position: 66.95
GC content: 66.41
Gene sequence:
>1539_bases ATGAATCTTCTCAAAGCCCTCGCTGCGGTCAGCAGCATGACCCTGCTCTCACGCATCCTGGGATTCGCCCGCGACACGAT CATCGCCCGGGTCTTTGGCGCCGGCATGCTGACCGATGCTTTCTTCGTGGCGTTCAAGATCCCCAACCTGTTGCGGCGCC TCTTCGCCGAGGGCGCGTTTTCCCAGGCTTTCGTGCCGATTCTCGCCGAATACAAGAACCGCAAGGGGCATGACGCGACG CGCGTGCTCGTCAGCCAGGTCGGCACCGCACTGACCCTCGCGCTGGTCGCGGTCGCCGTGCTCGGCATCCTCGGCGCGCC GTGGATCGCCTATATCAGTGCGCCGGGTTTTCGCGCCGACCCGCAAAAGTTCGAATTGACGGTGACCCTGCTGCGCATCA CCTTCCCCTACATCATCTTCATTTCGCTGGTGGCGCTCGCGGCAGGCGTTCTCAATACCTGGAGCCGTTTTTCCGTGCCC GCGTTCGCGCCGGTCCTGCTCAACGTCGCGATGATCGCCGCGGCACTCGGGCTCGCACCCTATTTCGACCCGCCTGTCCT TGCGCTCGGCTGGGGGGTCGCGCTCGGGGGCGTGCTGCAGCTCGCATGGATGCTGCCGCACCTCGCGAAGCTCGACATGC TGCCGCGCCCGGCCCGGCATTTCGACGACCCCGGCGTACGCCGCGTCCTCAAGCTGATGGCGCCCGCGACGCTCGGCGTT TCGGTCGCGCAGATCAGCCTCTTGATCAACACGATTTTCGCCTCCTTCCTCGCGACCGGCAGCGTGTCGTGGCTCTATTA CGCCGACCGGCTGATGGAGTTTCCGACCGGCATGCTCGGCGTGGCGCTCGGCACCATCCTGCTGCCAAGCCTCGCCAAGC ACTACGCGGACGACTCGCCAGCCGACTATTCGCGACTCCTCGACTGGGGCCTGCGCCTCACGCTGCTGCTCGCGTTGCCG TCAGCGGCGGCACTGGCCGTGCTCGCGGTGCCGCTCATCACGACGCTCTTCCACTACGGTGCCTTCACGGCCGCAGACGT GACGATGACGCAGCGCGCGCTGGTCGCCTACAGCCTCGGACTCGTCGGCCTGATCCTCGTCAAGGTGCTGGCACCCGGTT TCTATGCGCGGCAGAACATCCGCACGCCGGTGAAGATCGCGCTCTTCACGCTCGTCGCTACCCAGCTCATGAACCTGGCG TTCATCGTCCCGCTCGGTCACGCCGGACTCGCGCTGGCGATCGGGCTCGGTGCCTGTCTCAACGCAGGATGGCTACTCCA TCTGCTGAAGAAGCAGGGAATCTACCGCCCGCAACCGGGCTGGTTCGGCTATTCACTGCGCCTGACGGTGGCCGTCGGTA TCATGGGAGCCGCGCTGTTCTTCGCCATGGGCACGGCGTCGTGGTGGCTCGCGGCCGACTTTCTCGAGCGCCTGCTCAGG CTGTCGCTGCTCGTCGGCGGCGGCGCGCTGCTGTACTTCGCCGCGCTCGGCGTCATGGGCTTCCGCCCCGCGCAATTCGC GCGCCGCGCGGCGGAATAA
Upstream 100 bases:
>100_bases ATTGTACGAGACAAACGGCCGACAAATCAAGCCGCCCCCCCGTGCGGTTGCGGCACCCCCGCCGGGGGGCCACAATGCGC GCACAATTACGGCGCGCCCC
Downstream 100 bases:
>100_bases GCCGCTGAATCGGCTAGAATCAGTCCTTTTCGCGCTCTGTTCCTTCGGCCCGATTCATGCGCATCACCCACGGTTTTCGT CCGCTCGGCACGGCCCACGC
Product: virulence factor MVIN-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MNLLKALAAVSSMTLLSRILGFARDTIIARVFGAGMLTDAFFVAFKIPNLLRRLFAEGAFSQAFVPILAEYKNRKGHDAT RVLVSQVGTALTLALVAVAVLGILGAPWIAYISAPGFRADPQKFELTVTLLRITFPYIIFISLVALAAGVLNTWSRFSVP AFAPVLLNVAMIAAALGLAPYFDPPVLALGWGVALGGVLQLAWMLPHLAKLDMLPRPARHFDDPGVRRVLKLMAPATLGV SVAQISLLINTIFASFLATGSVSWLYYADRLMEFPTGMLGVALGTILLPSLAKHYADDSPADYSRLLDWGLRLTLLLALP SAAALAVLAVPLITTLFHYGAFTAADVTMTQRALVAYSLGLVGLILVKVLAPGFYARQNIRTPVKIALFTLVATQLMNLA FIVPLGHAGLALAIGLGACLNAGWLLHLLKKQGIYRPQPGWFGYSLRLTVAVGIMGAALFFAMGTASWWLAADFLERLLR LSLLVGGGALLYFAALGVMGFRPAQFARRAAE
Sequences:
>Translated_512_residues MNLLKALAAVSSMTLLSRILGFARDTIIARVFGAGMLTDAFFVAFKIPNLLRRLFAEGAFSQAFVPILAEYKNRKGHDAT RVLVSQVGTALTLALVAVAVLGILGAPWIAYISAPGFRADPQKFELTVTLLRITFPYIIFISLVALAAGVLNTWSRFSVP AFAPVLLNVAMIAAALGLAPYFDPPVLALGWGVALGGVLQLAWMLPHLAKLDMLPRPARHFDDPGVRRVLKLMAPATLGV SVAQISLLINTIFASFLATGSVSWLYYADRLMEFPTGMLGVALGTILLPSLAKHYADDSPADYSRLLDWGLRLTLLLALP SAAALAVLAVPLITTLFHYGAFTAADVTMTQRALVAYSLGLVGLILVKVLAPGFYARQNIRTPVKIALFTLVATQLMNLA FIVPLGHAGLALAIGLGACLNAGWLLHLLKKQGIYRPQPGWFGYSLRLTVAVGIMGAALFFAMGTASWWLAADFLERLLR LSLLVGGGALLYFAALGVMGFRPAQFARRAAE >Mature_512_residues MNLLKALAAVSSMTLLSRILGFARDTIIARVFGAGMLTDAFFVAFKIPNLLRRLFAEGAFSQAFVPILAEYKNRKGHDAT RVLVSQVGTALTLALVAVAVLGILGAPWIAYISAPGFRADPQKFELTVTLLRITFPYIIFISLVALAAGVLNTWSRFSVP AFAPVLLNVAMIAAALGLAPYFDPPVLALGWGVALGGVLQLAWMLPHLAKLDMLPRPARHFDDPGVRRVLKLMAPATLGV SVAQISLLINTIFASFLATGSVSWLYYADRLMEFPTGMLGVALGTILLPSLAKHYADDSPADYSRLLDWGLRLTLLLALP SAAALAVLAVPLITTLFHYGAFTAADVTMTQRALVAYSLGLVGLILVKVLAPGFYARQNIRTPVKIALFTLVATQLMNLA FIVPLGHAGLALAIGLGACLNAGWLLHLLKKQGIYRPQPGWFGYSLRLTVAVGIMGAALFFAMGTASWWLAADFLERLLR LSLLVGGGALLYFAALGVMGFRPAQFARRAAE
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=509, Percent_Identity=65.2259332023576, Blast_Score=638, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 54859; Mature: 54859
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKALAAVSSMTLLSRILGFARDTIIARVFGAGMLTDAFFVAFKIPNLLRRLFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILAEYKNRKGHDATRVLVSQVGTALTLALVAVAVLGILGAPWIAYISAPGFRAD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC PQKFELTVTLLRITFPYIIFISLVALAAGVLNTWSRFSVPAFAPVLLNVAMIAAALGLAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC YFDPPVLALGWGVALGGVLQLAWMLPHLAKLDMLPRPARHFDDPGVRRVLKLMAPATLGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHH SVAQISLLINTIFASFLATGSVSWLYYADRLMEFPTGMLGVALGTILLPSLAKHYADDSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC ADYSRLLDWGLRLTLLLALPSAAALAVLAVPLITTLFHYGAFTAADVTMTQRALVAYSLG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVGLILVKVLAPGFYARQNIRTPVKIALFTLVATQLMNLAFIVPLGHAGLALAIGLGACL HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH NAGWLLHLLKKQGIYRPQPGWFGYSLRLTVAVGIMGAALFFAMGTASWWLAADFLERLLR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLVGGGALLYFAALGVMGFRPAQFARRAAE HHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MNLLKALAAVSSMTLLSRILGFARDTIIARVFGAGMLTDAFFVAFKIPNLLRRLFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILAEYKNRKGHDATRVLVSQVGTALTLALVAVAVLGILGAPWIAYISAPGFRAD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC PQKFELTVTLLRITFPYIIFISLVALAAGVLNTWSRFSVPAFAPVLLNVAMIAAALGLAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC YFDPPVLALGWGVALGGVLQLAWMLPHLAKLDMLPRPARHFDDPGVRRVLKLMAPATLGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHH SVAQISLLINTIFASFLATGSVSWLYYADRLMEFPTGMLGVALGTILLPSLAKHYADDSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC ADYSRLLDWGLRLTLLLALPSAAALAVLAVPLITTLFHYGAFTAADVTMTQRALVAYSLG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVGLILVKVLAPGFYARQNIRTPVKIALFTLVATQLMNLAFIVPLGHAGLALAIGLGACL HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH NAGWLLHLLKKQGIYRPQPGWFGYSLRLTVAVGIMGAALFFAMGTASWWLAADFLERLLR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLVGGGALLYFAALGVMGFRPAQFARRAAE HHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]