| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317865
Identifier: 74317865
GI number: 74317865
Start: 1941916
End: 1942488
Strand: Reverse
Name: 74317865
Synonym: Tbd_1847
Alternate gene names: NA
Gene position: 1942488-1941916 (Counterclockwise)
Preceding gene: 74317866
Following gene: 74317864
Centisome position: 66.76
GC content: 64.57
Gene sequence:
>573_bases ATGACGACCGTCGCCGTCGTGCGCAAGGAGGGCCGCATCGCGATCGCCGCCGACACGCTGACGAAATGGGGCGGTGGCAA GGAATCGGCCGACTACGTCGCGAATCACGAAAAGATCATCCGGGTCGGCGACAGCTACGTCGCGATCACCGGATCGGCGA CCTTCAAGCTGATTCTCGCCGACTATTTCGAATCGCTCGACGAGCCACCGCGGCTCGATTCGGTGGGCGAGATATTCCGT GTCTGGAACACGCTGCACGGCGCGCTCAAGGAGCATTACTATCTTCAGACGGGCGACGACAAAGAGGAAGACCTCGAGTC GAGCCGCATGGACGTGCTCATCGCAAGCCCGCGCGGGATCTTCGGCGTCGCGGCGCACCGGACCGTGCAGGAGTTCTCGA AGTTCTACGCCTACGGCAGCGGCAGCCCCTACGCACTTGGCGCGATGTACGCAGCATTCCGCGCGCCCTCGCTCGACGCC GAGGGGGTCGCGCGACTCGGCGTGATGGCCGCCGCCGAGTTTCACGACGAGTCGGGCCTGCCGGTGCAGTCGTTCGTACT GGATGAGGAGTAG
Upstream 100 bases:
>100_bases GCCGGGCAGTCGTTCGAAGTGCCTGCGAACTCGAGCTTCGAGATCGAAGTCGCGGCCGAGCCCTACCACTACGTGTGCCA TTTCGGCTGAGCGCTGAGCC
Downstream 100 bases:
>100_bases ATCAAGATGCCAAGTTTCGACATCGTGTCCGAGGTCGACAAACAGGAAGTCCGCAATGCGATCGACCAGGTCAACAAGGA AGTGTCCACGCGCTTCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFR VWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDA EGVARLGVMAAAEFHDESGLPVQSFVLDEE
Sequences:
>Translated_190_residues MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFR VWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDA EGVARLGVMAAAEFHDESGLPVQSFVLDEE >Mature_189_residues TTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFRV WNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAE GVARLGVMAAAEFHDESGLPVQSFVLDEE
Specific function: Unknown
COG id: COG5405
COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20746; Mature: 20615
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILA CCCEEEEECCCCEEEEECCHHHCCCCCCCHHHHHCCCEEEEECCCEEEEECCCHHHHHHH DYFESLDEPPRLDSVGEIFRVWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHCCCEEEEECCCCE FGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAEGVARLGVMAAAEFHDESGL EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC PVQSFVLDEE CHHHEEECCC >Mature Secondary Structure TTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILA CCEEEEECCCCEEEEECCHHHCCCCCCCHHHHHCCCEEEEECCCEEEEECCCHHHHHHH DYFESLDEPPRLDSVGEIFRVWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHCCCEEEEECCCCE FGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAEGVARLGVMAAAEFHDESGL EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC PVQSFVLDEE CHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA