Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317865

Identifier: 74317865

GI number: 74317865

Start: 1941916

End: 1942488

Strand: Reverse

Name: 74317865

Synonym: Tbd_1847

Alternate gene names: NA

Gene position: 1942488-1941916 (Counterclockwise)

Preceding gene: 74317866

Following gene: 74317864

Centisome position: 66.76

GC content: 64.57

Gene sequence:

>573_bases
ATGACGACCGTCGCCGTCGTGCGCAAGGAGGGCCGCATCGCGATCGCCGCCGACACGCTGACGAAATGGGGCGGTGGCAA
GGAATCGGCCGACTACGTCGCGAATCACGAAAAGATCATCCGGGTCGGCGACAGCTACGTCGCGATCACCGGATCGGCGA
CCTTCAAGCTGATTCTCGCCGACTATTTCGAATCGCTCGACGAGCCACCGCGGCTCGATTCGGTGGGCGAGATATTCCGT
GTCTGGAACACGCTGCACGGCGCGCTCAAGGAGCATTACTATCTTCAGACGGGCGACGACAAAGAGGAAGACCTCGAGTC
GAGCCGCATGGACGTGCTCATCGCAAGCCCGCGCGGGATCTTCGGCGTCGCGGCGCACCGGACCGTGCAGGAGTTCTCGA
AGTTCTACGCCTACGGCAGCGGCAGCCCCTACGCACTTGGCGCGATGTACGCAGCATTCCGCGCGCCCTCGCTCGACGCC
GAGGGGGTCGCGCGACTCGGCGTGATGGCCGCCGCCGAGTTTCACGACGAGTCGGGCCTGCCGGTGCAGTCGTTCGTACT
GGATGAGGAGTAG

Upstream 100 bases:

>100_bases
GCCGGGCAGTCGTTCGAAGTGCCTGCGAACTCGAGCTTCGAGATCGAAGTCGCGGCCGAGCCCTACCACTACGTGTGCCA
TTTCGGCTGAGCGCTGAGCC

Downstream 100 bases:

>100_bases
ATCAAGATGCCAAGTTTCGACATCGTGTCCGAGGTCGACAAACAGGAAGTCCGCAATGCGATCGACCAGGTCAACAAGGA
AGTGTCCACGCGCTTCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFR
VWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDA
EGVARLGVMAAAEFHDESGLPVQSFVLDEE

Sequences:

>Translated_190_residues
MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFR
VWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDA
EGVARLGVMAAAEFHDESGLPVQSFVLDEE
>Mature_189_residues
TTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILADYFESLDEPPRLDSVGEIFRV
WNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGIFGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAE
GVARLGVMAAAEFHDESGLPVQSFVLDEE

Specific function: Unknown

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20746; Mature: 20615

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILA
CCCEEEEECCCCEEEEECCHHHCCCCCCCHHHHHCCCEEEEECCCEEEEECCCHHHHHHH
DYFESLDEPPRLDSVGEIFRVWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGI
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHCCCEEEEECCCCE
FGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAEGVARLGVMAAAEFHDESGL
EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
PVQSFVLDEE
CHHHEEECCC
>Mature Secondary Structure 
TTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHEKIIRVGDSYVAITGSATFKLILA
CCEEEEECCCCEEEEECCHHHCCCCCCCHHHHHCCCEEEEECCCEEEEECCCHHHHHHH
DYFESLDEPPRLDSVGEIFRVWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGI
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHCCCEEEEECCCCE
FGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAEGVARLGVMAAAEFHDESGL
EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
PVQSFVLDEE
CHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA