| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317861
Identifier: 74317861
GI number: 74317861
Start: 1939846
End: 1940355
Strand: Direct
Name: 74317861
Synonym: Tbd_1843
Alternate gene names: NA
Gene position: 1939846-1940355 (Clockwise)
Preceding gene: 74317860
Following gene: 74317871
Centisome position: 66.67
GC content: 64.51
Gene sequence:
>510_bases ATGAAAGCATTCCTCGCTGCGTGGGTCGGGCTGTGGCTCGGGTGCGCGCCGCCCGCGCTCGCGGACGCAAAATGGGTCGC GACGTCCTACGCGCCGCCCAAGGTGGTATTCGAGTTCTTTCTCGACCATCCGCAGAAGATCGCGAGTGCCCTCTACTGGC TGCGCTCGCTGACCAACCCGCTGATGGACGCCCCCTACAACTACGCCCCCGAGGACCTCGACATCGTGGTCGTCGTCCAC GGCACGGAAATCGTGACGCTCGCGAAGCGCAACGAAGCCCGGTATGAGGAAGCGGTCGAGCGCATGCGTTATTACGCGGA ACTGGGCGTGCGCTTCAAGGTGTGCGGCGAGGCGGCTGCCGAATACGGTTACGTGCTGCGCGATTTCCAGGATTTCGTCG AGGTCGTCCCCAATGCGATCACCGAGCTCGCGCATTGGCAGCAGCAAGGCTACGCGCTGATCGTGCCGCGGGTGATGGAG CGGACGGTCGACCTCGACGCGATCCGCTAG
Upstream 100 bases:
>100_bases GGCCCGCCTTCAGCTGTTCCAGACGCTGCGCCGCCTGCAGCAGAACGCCGCACAGCGCCTATAAAGCAGAGTTCCTTGGA CTGCAAATCAGGAGCGCCCC
Downstream 100 bases:
>100_bases CCGCCCGCGCTCACTCGGGCCAGTGCTTGATGTAACGCTTCAGGAGGCTGTTCTCGAAGTTCGCTTCCTTGAGGCAGGCG CGCGCGACATCATGAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKAFLAAWVGLWLGCAPPALADAKWVATSYAPPKVVFEFFLDHPQKIASALYWLRSLTNPLMDAPYNYAPEDLDIVVVVH GTEIVTLAKRNEARYEEAVERMRYYAELGVRFKVCGEAAAEYGYVLRDFQDFVEVVPNAITELAHWQQQGYALIVPRVME RTVDLDAIR
Sequences:
>Translated_169_residues MKAFLAAWVGLWLGCAPPALADAKWVATSYAPPKVVFEFFLDHPQKIASALYWLRSLTNPLMDAPYNYAPEDLDIVVVVH GTEIVTLAKRNEARYEEAVERMRYYAELGVRFKVCGEAAAEYGYVLRDFQDFVEVVPNAITELAHWQQQGYALIVPRVME RTVDLDAIR >Mature_169_residues MKAFLAAWVGLWLGCAPPALADAKWVATSYAPPKVVFEFFLDHPQKIASALYWLRSLTNPLMDAPYNYAPEDLDIVVVVH GTEIVTLAKRNEARYEEAVERMRYYAELGVRFKVCGEAAAEYGYVLRDFQDFVEVVPNAITELAHWQQQGYALIVPRVME RTVDLDAIR
Specific function: Unknown
COG id: COG1416
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19213; Mature: 19213
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFLAAWVGLWLGCAPPALADAKWVATSYAPPKVVFEFFLDHPQKIASALYWLRSLTNP CHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LMDAPYNYAPEDLDIVVVVHGTEIVTLAKRNEARYEEAVERMRYYAELGVRFKVCGEAAA HHCCCCCCCCCCCEEEEEEECCEEEEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EYGYVLRDFQDFVEVVPNAITELAHWQQQGYALIVPRVMERTVDLDAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCHHCCC >Mature Secondary Structure MKAFLAAWVGLWLGCAPPALADAKWVATSYAPPKVVFEFFLDHPQKIASALYWLRSLTNP CHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LMDAPYNYAPEDLDIVVVVHGTEIVTLAKRNEARYEEAVERMRYYAELGVRFKVCGEAAA HHCCCCCCCCCCCEEEEEEECCEEEEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EYGYVLRDFQDFVEVVPNAITELAHWQQQGYALIVPRVMERTVDLDAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA