Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317859

Identifier: 74317859

GI number: 74317859

Start: 1938538

End: 1938879

Strand: Direct

Name: 74317859

Synonym: Tbd_1841

Alternate gene names: NA

Gene position: 1938538-1938879 (Clockwise)

Preceding gene: 74317858

Following gene: 74317860

Centisome position: 66.62

GC content: 60.53

Gene sequence:

>342_bases
ATGCCCACGATCGTCGAAGAACTGGTCCGCAAGAAGTGCGCGCCCTGCGAAGGCGGCATCGCGCCGCTGACCGACGCGCA
GGTTGCCCCCATGCTCAAAGGCCTGTCGGGCTGGCAGCGCGACGGCATCAAGATCGTCAAGGAATACAAGTTCAAGGACC
ATTACCAGGCGCAGGCCTTCACCAACGCGGTGATGTGGGTGTCGCACCGCGAGGATCATCATCCCTACCTGATCGTCGGC
TACAACACCGTCAAGGTCGAGTTCTGGACCCACGCGATCGAGGGCCTGTCGGAAAACGATTTCATCTGTGCGGCCAAGGT
CGACTCGCTTCTCGATCTCTGA

Upstream 100 bases:

>100_bases
CTGCAACGCCAATACCGGCGCCGGCTGGTTCCCCGAAGACGAGGCGCACGTCGGCGCCTATCTCAACGAGCAGTATTACA
AGTTCAAGTAAGGAAACGCC

Downstream 100 bases:

>100_bases
GCCGCGCCTCCCGGAGCGGCGGCAACTGACGACGGACAGGGCCCTGCGATTCTGAACACGCTCACCGGGCAAGTTGTCGC
AGCCTTCAGTCGCCGCTTCA

Product: pterin-4-alpha-carbinolamine dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVG
YNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL

Sequences:

>Translated_113_residues
MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVG
YNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL
>Mature_112_residues
PTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVGY
NTVKVEFWTHAIEGLSENDFICAAKVDSLLDL

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHS_THIDA (Q3SHT9)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_315599.1
- ProteinModelPortal:   Q3SHT9
- SMR:   Q3SHT9
- STRING:   Q3SHT9
- GeneID:   3671506
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1841
- NMPDR:   fig|292415.3.peg.1937
- eggNOG:   COG2154
- HOGENOM:   HBG705804
- OMA:   ILTEWGK
- PhylomeDB:   Q3SHT9
- BioCyc:   TDEN292415:TBD_1841-MONOMER
- HAMAP:   MF_00434
- InterPro:   IPR001533
- Gene3D:   G3DSA:3.30.1360.20
- PANTHER:   PTHR12599

Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh

EC number: =4.2.1.96

Molecular weight: Translated: 12774; Mature: 12643

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAF
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHH
TNAVMWVSHREDHHPYLIVGYNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL
HHHHEEEECCCCCCCEEEEECCEEEEEEEHHHHCCCCCCCEEEHCCHHHHHCC
>Mature Secondary Structure 
PTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAF
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHH
TNAVMWVSHREDHHPYLIVGYNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL
HHHHEEEECCCCCCCEEEEECCEEEEEEEHHHHCCCCCCCEEEHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA