| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317859
Identifier: 74317859
GI number: 74317859
Start: 1938538
End: 1938879
Strand: Direct
Name: 74317859
Synonym: Tbd_1841
Alternate gene names: NA
Gene position: 1938538-1938879 (Clockwise)
Preceding gene: 74317858
Following gene: 74317860
Centisome position: 66.62
GC content: 60.53
Gene sequence:
>342_bases ATGCCCACGATCGTCGAAGAACTGGTCCGCAAGAAGTGCGCGCCCTGCGAAGGCGGCATCGCGCCGCTGACCGACGCGCA GGTTGCCCCCATGCTCAAAGGCCTGTCGGGCTGGCAGCGCGACGGCATCAAGATCGTCAAGGAATACAAGTTCAAGGACC ATTACCAGGCGCAGGCCTTCACCAACGCGGTGATGTGGGTGTCGCACCGCGAGGATCATCATCCCTACCTGATCGTCGGC TACAACACCGTCAAGGTCGAGTTCTGGACCCACGCGATCGAGGGCCTGTCGGAAAACGATTTCATCTGTGCGGCCAAGGT CGACTCGCTTCTCGATCTCTGA
Upstream 100 bases:
>100_bases CTGCAACGCCAATACCGGCGCCGGCTGGTTCCCCGAAGACGAGGCGCACGTCGGCGCCTATCTCAACGAGCAGTATTACA AGTTCAAGTAAGGAAACGCC
Downstream 100 bases:
>100_bases GCCGCGCCTCCCGGAGCGGCGGCAACTGACGACGGACAGGGCCCTGCGATTCTGAACACGCTCACCGGGCAAGTTGTCGC AGCCTTCAGTCGCCGCTTCA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVG YNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL
Sequences:
>Translated_113_residues MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVG YNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL >Mature_112_residues PTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAFTNAVMWVSHREDHHPYLIVGY NTVKVEFWTHAIEGLSENDFICAAKVDSLLDL
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_THIDA (Q3SHT9)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315599.1 - ProteinModelPortal: Q3SHT9 - SMR: Q3SHT9 - STRING: Q3SHT9 - GeneID: 3671506 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1841 - NMPDR: fig|292415.3.peg.1937 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: ILTEWGK - PhylomeDB: Q3SHT9 - BioCyc: TDEN292415:TBD_1841-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 12774; Mature: 12643
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAF CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHH TNAVMWVSHREDHHPYLIVGYNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL HHHHEEEECCCCCCCEEEEECCEEEEEEEHHHHCCCCCCCEEEHCCHHHHHCC >Mature Secondary Structure PTIVEELVRKKCAPCEGGIAPLTDAQVAPMLKGLSGWQRDGIKIVKEYKFKDHYQAQAF CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHH TNAVMWVSHREDHHPYLIVGYNTVKVEFWTHAIEGLSENDFICAAKVDSLLDL HHHHEEEECCCCCCCEEEEECCEEEEEEEHHHHCCCCCCCEEEHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA