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The map label for this gene is yccZ [C]

Identifier: 74317813

GI number: 74317813

Start: 1896480

End: 1897274

Strand: Reverse

Name: yccZ [C]

Synonym: Tbd_1795

Alternate gene names: 74317813

Gene position: 1897274-1896480 (Counterclockwise)

Preceding gene: 74317814

Following gene: 74317812

Centisome position: 65.2

GC content: 61.64

Gene sequence:

>795_bases
ATGATGAAGTTGTGGCGTACCGTTTGTGCGATGTGTTTGATGTTGCTGGCACCGCCGGCGCTGAGCGGGGATACCGATTA
CCGCATGGGTGTCGGTGATGTGGTGAGGATCACTGTATATGGGCAGCCCGACCTCACCACCGATGCTCGGGTGAGCGCAA
AGGGCAACATCAGTTTTCCCTTGATCGGCGAGGTTAAGCTCGCAGGTACAACACCCGCTGAAGGGGAGCGGGAGATTGCC
AGCCGCCTCAGCAAAGGCGGGTTCGTCGTGCAGCCCTTCGTCACGCTGAACGTCGTGCAGTACCGCGGCCAGCAGGTCTC
CGTTTTGGGGCGGGTGAACCGCCCGGGCAAATATCCCCTGGAGAAAGCGGGCCGCGTCAGCGACGCGCTCGCCTTGGCAG
GCGGCATCCTCCCCGACGGCGCCGACGTCATCACGCTGGTTCGTGAGCGCGACGGCAAGATCGAATATCGCCAGATCGAT
GTGCTTGCGTTGTTTAACCCAGGTGGAGACCCCAACAATGTCGTGGTTCAGGACGGCGACATCATCAACGTCGCGCGCCA
GCCTATGTTCTACATCTACGGCGAAGTGCAGCGACCCGGTGCTTTCAGGCTCGAGCAGAACATGACGCTCATGCAGGCTC
TCTCGATGGGCGGCGGCCTCACGCCGCGCGGGACGCAGCGCGGGATCCGGATCATGCGGCGAGACGACAAGGGAGCGGTG
CGAGAAGTCAGCGGGGAACTGGGTGACCTCGTGAAACCCGACGACGTCATCTACGTCAAGGAAAGCCTGTTCTAA

Upstream 100 bases:

>100_bases
CGGTCCCGTTGTTTAACACCCGGCCGTAGCGGCGCCGAAGCGGCGAACTTGACTGGCAGGAGCGCGTCAGCCTGGGCTGG
CCGCGGATTGGAGAGAGTAG

Downstream 100 bases:

>100_bases
GAGAAACGTCGCTCCCTATCAGCCCGGGAGACGTTGGCCTCCCTGAGCACAGAAGAGGTATCAAATGAATTTCACACAGT
TGCTTCTCGTCCTCTACGCA

Product: polysaccharide export outer membrane protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMKLWRTVCAMCLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFPLIGEVKLAGTTPAEGEREIA
SRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPLEKAGRVSDALALAGGILPDGADVITLVRERDGKIEYRQID
VLALFNPGGDPNNVVVQDGDIINVARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAV
REVSGELGDLVKPDDVIYVKESLF

Sequences:

>Translated_264_residues
MMKLWRTVCAMCLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFPLIGEVKLAGTTPAEGEREIA
SRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPLEKAGRVSDALALAGGILPDGADVITLVRERDGKIEYRQID
VLALFNPGGDPNNVVVQDGDIINVARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAV
REVSGELGDLVKPDDVIYVKESLF
>Mature_264_residues
MMKLWRTVCAMCLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFPLIGEVKLAGTTPAEGEREIA
SRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPLEKAGRVSDALALAGGILPDGADVITLVRERDGKIEYRQID
VLALFNPGGDPNNVVVQDGDIINVARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAV
REVSGELGDLVKPDDVIYVKESLF

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=229, Percent_Identity=30.5676855895196, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788376, Length=239, Percent_Identity=30.5439330543933, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 28725; Mature: 28725

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLWRTVCAMCLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFP
CHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCC
LIGEVKLAGTTPAEGEREIASRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPL
EEEEEEECCCCCCCCHHHHHHHHHCCCEEEECHHEEEEEECCCCEEEEEEECCCCCCCCH
EKAGRVSDALALAGGILPDGADVITLVRERDGKIEYRQIDVLALFNPGGDPNNVVVQDGD
HHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEECCC
IINVARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAV
EEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH
REVSGELGDLVKPDDVIYVKESLF
HHHHHHHCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MMKLWRTVCAMCLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFP
CHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCEEECCCCCCCC
LIGEVKLAGTTPAEGEREIASRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPL
EEEEEEECCCCCCCCHHHHHHHHHCCCEEEECHHEEEEEECCCCEEEEEEECCCCCCCCH
EKAGRVSDALALAGGILPDGADVITLVRERDGKIEYRQIDVLALFNPGGDPNNVVVQDGD
HHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEECCC
IINVARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAV
EEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH
REVSGELGDLVKPDDVIYVKESLF
HHHHHHHCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]