| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317747
Identifier: 74317747
GI number: 74317747
Start: 1813832
End: 1814596
Strand: Direct
Name: 74317747
Synonym: Tbd_1729
Alternate gene names: NA
Gene position: 1813832-1814596 (Clockwise)
Preceding gene: 74317746
Following gene: 74317748
Centisome position: 62.34
GC content: 67.45
Gene sequence:
>765_bases ATGGCCCGCGCCGCTTTCAGACCCTGGATCTTCGCCGCGGCCGCCGTCGCGCTCAGTGCACCCGCACATGCCGTCGACTG GAACGAATTGCTGCGCGGCGTGCTCGGCCAGCCGTCGGGGCAAACGGCAGCGACACCGAGCGTCGACGCGCTTTCCAATG CCGAGGTCAACGCCGGACTTAAGGAGGCGCTGACCCGCGGCGCCGACGCGGCGGTTGCGCAACTCGGTCGCCCGGACGGT TTTTTCGGCAACCCCCAACTCAGAATCCCGCTGCCGCCTGCGCTGCAAAAAGCCGAGAAAGCGATGCGCCTGCTTGGCAT GGGCAGCCAGGCTGACGCACTCGTGCTGTCGATGAACCGTGCCGCCGAAGCCGCCGTGCCCGCTGCGCGCGGCCTGCTCG TCGACGCGGTGAAGCAGATGACGCTCGAAGACGCGAAAGGCATCCTGACCGGCGGCCAAACCTCTGCCACCGACTTCTTC CGCGCGAAGACCGAGACGAAGCTGGCCGAGCGCTTCCAGCCCGTCGTGAAGTCAACGACCGACAAGATCGGCCTCGCCCA GCAGTACAACCGTTACGCCGGAATGGCCCAGCAATTCAATCTGGTCGACCCGGCGCAGGCGACCGTCGAGGACTACGTGA CGCGGCAGGCGCTCGACCGGCTCTACACGCTGATCGGCGAGAAGGAGGCGGCGCTGCGCGCGAACCCGCTCCAGGCCGGC AGCGAACTGCTGAAAAAGGTTTTCGGCGCCGCGAGCGGCCAGTAG
Upstream 100 bases:
>100_bases TGGCCACACAACGGGCACGTCACGCTGCAGCGCGGCGAGCGTTCGCGTCTGGCGGACTATGCTGCAGAAGTGCTCTGATC AAAACCGCTAAGGAAAGACG
Downstream 100 bases:
>100_bases CGGCGCGGTACAGGGGATGCCGCGATGAAAAGGACGCATCGGAGCACCACAGCCCTTCTATTCGCCGGCCTCCTCATCGC CTCTCCCCTCCACGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MARAAFRPWIFAAAAVALSAPAHAVDWNELLRGVLGQPSGQTAATPSVDALSNAEVNAGLKEALTRGADAAVAQLGRPDG FFGNPQLRIPLPPALQKAEKAMRLLGMGSQADALVLSMNRAAEAAVPAARGLLVDAVKQMTLEDAKGILTGGQTSATDFF RAKTETKLAERFQPVVKSTTDKIGLAQQYNRYAGMAQQFNLVDPAQATVEDYVTRQALDRLYTLIGEKEAALRANPLQAG SELLKKVFGAASGQ
Sequences:
>Translated_254_residues MARAAFRPWIFAAAAVALSAPAHAVDWNELLRGVLGQPSGQTAATPSVDALSNAEVNAGLKEALTRGADAAVAQLGRPDG FFGNPQLRIPLPPALQKAEKAMRLLGMGSQADALVLSMNRAAEAAVPAARGLLVDAVKQMTLEDAKGILTGGQTSATDFF RAKTETKLAERFQPVVKSTTDKIGLAQQYNRYAGMAQQFNLVDPAQATVEDYVTRQALDRLYTLIGEKEAALRANPLQAG SELLKKVFGAASGQ >Mature_253_residues ARAAFRPWIFAAAAVALSAPAHAVDWNELLRGVLGQPSGQTAATPSVDALSNAEVNAGLKEALTRGADAAVAQLGRPDGF FGNPQLRIPLPPALQKAEKAMRLLGMGSQADALVLSMNRAAEAAVPAARGLLVDAVKQMTLEDAKGILTGGQTSATDFFR AKTETKLAERFQPVVKSTTDKIGLAQQYNRYAGMAQQFNLVDPAQATVEDYVTRQALDRLYTLIGEKEAALRANPLQAGS ELLKKVFGAASGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26801; Mature: 26670
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAAFRPWIFAAAAVALSAPAHAVDWNELLRGVLGQPSGQTAATPSVDALSNAEVNAGL CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHCCH KEALTRGADAAVAQLGRPDGFFGNPQLRIPLPPALQKAEKAMRLLGMGSQADALVLSMNR HHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHEEEHHH AAEAAVPAARGLLVDAVKQMTLEDAKGILTGGQTSATDFFRAKTETKLAERFQPVVKSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKIGLAQQYNRYAGMAQQFNLVDPAQATVEDYVTRQALDRLYTLIGEKEAALRANPLQAG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH SELLKKVFGAASGQ HHHHHHHHCCCCCC >Mature Secondary Structure ARAAFRPWIFAAAAVALSAPAHAVDWNELLRGVLGQPSGQTAATPSVDALSNAEVNAGL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHCCH KEALTRGADAAVAQLGRPDGFFGNPQLRIPLPPALQKAEKAMRLLGMGSQADALVLSMNR HHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHEEEHHH AAEAAVPAARGLLVDAVKQMTLEDAKGILTGGQTSATDFFRAKTETKLAERFQPVVKSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKIGLAQQYNRYAGMAQQFNLVDPAQATVEDYVTRQALDRLYTLIGEKEAALRANPLQAG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH SELLKKVFGAASGQ HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA