| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is lplT [H]
Identifier: 74317736
GI number: 74317736
Start: 1804287
End: 1805504
Strand: Direct
Name: lplT [H]
Synonym: Tbd_1718
Alternate gene names: 74317736
Gene position: 1804287-1805504 (Clockwise)
Preceding gene: 74317733
Following gene: 74317746
Centisome position: 62.01
GC content: 63.79
Gene sequence:
>1218_bases TTGAACCGCGCTTTCTACACCATCCTGCTGGCGCAGTTCCTGTCCGCGCTGGCCGACAACGCGCTGCTGTTCGCAGCCAT CGGCTTGCTGACCTTTTTCTCTGCGCCGGAATGGCACTCGCCCCTGCTGCAGACGGTTTTCGTCATCGCCTACATCGTAT TGGCGCCCCTGGTCGGGCCTTTTGCCGACGCCTTGCCCAAGGGCCGCGTCATGCTCATCGCGAACACAGTCAAGTTCGCC GGCTGCCTGGTCATGCTCGCCGGACTCCACCCGCTGCTGGCCTACGCGCTCGTCGGCATCGGCGCGGCGATGTACTCGCC CGCCAAGTACGGCATCCTCACCGAGTTGCTGCCGCCGGAAAAACTCGTCGTCGCGAACAGCTGGATGGAAGGCGCGACCG TCGCTGCAATCGTGCTCGGTGCGATCATCGGCGGCGCGCTCATCAACCCCGATCTCGCCCGGAGCATTCTTTTCAGCCTC GGCCTCGACGATCAGCTGATCGCACCAAAGTTCGCCATCGTCGCCATTACCGGTCTCTACTTCGCGGCCGCGGTCATCAA CCTCTTCATCCCGCGTCTGCCGATCGACCACACCCTGCCGAGCAAATCTCCGCTGTTCATCCTGCACGACTTCTGGCACA GCTTCCGGCTGCTCTGGCGCGACCCGCTCGGACAGGTCTCGCTGGCGGTGACGACGCTGTTCTGGGGCGTGGGCGCAACG CTGCGCCTGCTCATCATCGCGTGGGCCGCGCTCAACCTGAAATACGGACTCGACCAGGCGACGCAGCTCACCGCCGCCAG CGCGTTCGGGATCGCGATCGGCGCGGTGCTCGCCGGCAAGTTTGTCCGTCTGCAGCGCGCGGTGAGCGTGTTGCCGGCCG GCATCCTTCTCGGCTTCGTGCCGATCGCGCTGATCTGGGTGGAAAGCCTGATCCCGGCCGTGCTGCTACTGACCTTTGCC GGCATTCTGGCGGGCTACTTCGTGGTGCCGATGAACGCCCTGCTGCAGCATCGCGGCCATCTTCTGATGGGCGCCGGCCA TTCGATCGCGCAACAGAATTTCAACGAGAACATCAGCATTCTGCTGCTGACCGGCGCGTACGCGCTCATGGTGCGGGCTG ACTGGCACATCCACACCATCGTGCTCGTATTCGGCCTCTTCATCAGCAGCATCATGTCGCTGATATGGCTGCGCCATCGC AACGACGTCGTGCACTAA
Upstream 100 bases:
>100_bases GTGTTGAAACCACCCGTTCATCAAACCCTTGTAATCACGGGGCTTTCACGTCCGTTCGCATGGACGCGCAAGGCGCCCCC CCGCCACTAGCCACTCCGAC
Downstream 100 bases:
>100_bases AAGCCGACTGGGCCGGTTAAGGGCAAGCTCTGCCTGCGGCCCTCAAAGGACGACGGGCCGGTTGTCCAGCTCGTCGGGAT TTTCCCCTGACGACGCCTCA
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MNRAFYTILLAQFLSALADNALLFAAIGLLTFFSAPEWHSPLLQTVFVIAYIVLAPLVGPFADALPKGRVMLIANTVKFA GCLVMLAGLHPLLAYALVGIGAAMYSPAKYGILTELLPPEKLVVANSWMEGATVAAIVLGAIIGGALINPDLARSILFSL GLDDQLIAPKFAIVAITGLYFAAAVINLFIPRLPIDHTLPSKSPLFILHDFWHSFRLLWRDPLGQVSLAVTTLFWGVGAT LRLLIIAWAALNLKYGLDQATQLTAASAFGIAIGAVLAGKFVRLQRAVSVLPAGILLGFVPIALIWVESLIPAVLLLTFA GILAGYFVVPMNALLQHRGHLLMGAGHSIAQQNFNENISILLLTGAYALMVRADWHIHTIVLVFGLFISSIMSLIWLRHR NDVVH
Sequences:
>Translated_405_residues MNRAFYTILLAQFLSALADNALLFAAIGLLTFFSAPEWHSPLLQTVFVIAYIVLAPLVGPFADALPKGRVMLIANTVKFA GCLVMLAGLHPLLAYALVGIGAAMYSPAKYGILTELLPPEKLVVANSWMEGATVAAIVLGAIIGGALINPDLARSILFSL GLDDQLIAPKFAIVAITGLYFAAAVINLFIPRLPIDHTLPSKSPLFILHDFWHSFRLLWRDPLGQVSLAVTTLFWGVGAT LRLLIIAWAALNLKYGLDQATQLTAASAFGIAIGAVLAGKFVRLQRAVSVLPAGILLGFVPIALIWVESLIPAVLLLTFA GILAGYFVVPMNALLQHRGHLLMGAGHSIAQQNFNENISILLLTGAYALMVRADWHIHTIVLVFGLFISSIMSLIWLRHR NDVVH >Mature_405_residues MNRAFYTILLAQFLSALADNALLFAAIGLLTFFSAPEWHSPLLQTVFVIAYIVLAPLVGPFADALPKGRVMLIANTVKFA GCLVMLAGLHPLLAYALVGIGAAMYSPAKYGILTELLPPEKLVVANSWMEGATVAAIVLGAIIGGALINPDLARSILFSL GLDDQLIAPKFAIVAITGLYFAAAVINLFIPRLPIDHTLPSKSPLFILHDFWHSFRLLWRDPLGQVSLAVTTLFWGVGAT LRLLIIAWAALNLKYGLDQATQLTAASAFGIAIGAVLAGKFVRLQRAVSVLPAGILLGFVPIALIWVESLIPAVLLLTFA GILAGYFVVPMNALLQHRGHLLMGAGHSIAQQNFNENISILLLTGAYALMVRADWHIHTIVLVFGLFISSIMSLIWLRHR NDVVH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=402, Percent_Identity=41.2935323383085, Blast_Score=252, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43644; Mature: 43644
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAFYTILLAQFLSALADNALLFAAIGLLTFFSAPEWHSPLLQTVFVIAYIVLAPLVGP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH FADALPKGRVMLIANTVKFAGCLVMLAGLHPLLAYALVGIGAAMYSPAKYGILTELLPPE HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC KLVVANSWMEGATVAAIVLGAIIGGALINPDLARSILFSLGLDDQLIAPKFAIVAITGLY CEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH FAAAVINLFIPRLPIDHTLPSKSPLFILHDFWHSFRLLWRDPLGQVSLAVTTLFWGVGAT HHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LRLLIIAWAALNLKYGLDQATQLTAASAFGIAIGAVLAGKFVRLQRAVSVLPAGILLGFV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIALIWVESLIPAVLLLTFAGILAGYFVVPMNALLQHRGHLLMGAGHSIAQQNFNENISI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCEE LLLTGAYALMVRADWHIHTIVLVFGLFISSIMSLIWLRHRNDVVH EEEECCEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNRAFYTILLAQFLSALADNALLFAAIGLLTFFSAPEWHSPLLQTVFVIAYIVLAPLVGP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH FADALPKGRVMLIANTVKFAGCLVMLAGLHPLLAYALVGIGAAMYSPAKYGILTELLPPE HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC KLVVANSWMEGATVAAIVLGAIIGGALINPDLARSILFSLGLDDQLIAPKFAIVAITGLY CEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH FAAAVINLFIPRLPIDHTLPSKSPLFILHDFWHSFRLLWRDPLGQVSLAVTTLFWGVGAT HHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LRLLIIAWAALNLKYGLDQATQLTAASAFGIAIGAVLAGKFVRLQRAVSVLPAGILLGFV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIALIWVESLIPAVLLLTFAGILAGYFVVPMNALLQHRGHLLMGAGHSIAQQNFNENISI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCEE LLLTGAYALMVRADWHIHTIVLVFGLFISSIMSLIWLRHRNDVVH EEEECCEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA