Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317734

Identifier: 74317734

GI number: 74317734

Start: 1802822

End: 1803190

Strand: Reverse

Name: 74317734

Synonym: Tbd_1716

Alternate gene names: NA

Gene position: 1803190-1802822 (Counterclockwise)

Preceding gene: 74317735

Following gene: 74317731

Centisome position: 61.97

GC content: 64.5

Gene sequence:

>369_bases
ATGCCCGACGGCAAGCGGCTGAGGTCGCTGTTCCACTCCCTGTCGGAGTCCCGGCAACAGGCCCTGCTCGATTTCGCCGA
ATTCCTGGCCGGCAAGGAAAGCGCGGACCGCGCCGTCGCCCCGCCCGCCGAGCCGCTGCCGATTCCGCGCCCGGCGCAGG
AAAACGTGGTCAAGGCGATCCAGCGTCTGATGCAGACCTATCCCATGCTCGATCGCAACCGGATCTTCCACGAAGCGTCC
GGTCAGATGACGCGCCATCTGGTGCACGGTGTCGCTGCCGCCGAGGCGATCGACGAGCTTGAACGGATTTTTGCCCGTCA
GTACCAGCAGCATCTCGAGTCGTTGACGAAGGACATCGAGGCATCCTGA

Upstream 100 bases:

>100_bases
AACTGCTCGACGCCTTCATCAGCTTCGTCGAAAACAAGTTCCAGCAGTGCAACATCGACGTCGCGCCGTTCCGGCGACCG
TTCAAGGGCCGCGCACGCTG

Downstream 100 bases:

>100_bases
CCGCGCCGGGCGCTTACTCGGGCAGGGGCGCGCCGCACTGCCAGCAGCTCAGGAAATTCCCCGGATTCCTCTCGGCGCAA
CGCGGACAGGTTTTTTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPDGKRLRSLFHSLSESRQQALLDFAEFLAGKESADRAVAPPAEPLPIPRPAQENVVKAIQRLMQTYPMLDRNRIFHEAS
GQMTRHLVHGVAAAEAIDELERIFARQYQQHLESLTKDIEAS

Sequences:

>Translated_122_residues
MPDGKRLRSLFHSLSESRQQALLDFAEFLAGKESADRAVAPPAEPLPIPRPAQENVVKAIQRLMQTYPMLDRNRIFHEAS
GQMTRHLVHGVAAAEAIDELERIFARQYQQHLESLTKDIEAS
>Mature_121_residues
PDGKRLRSLFHSLSESRQQALLDFAEFLAGKESADRAVAPPAEPLPIPRPAQENVVKAIQRLMQTYPMLDRNRIFHEASG
QMTRHLVHGVAAAEAIDELERIFARQYQQHLESLTKDIEAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13802; Mature: 13671

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGKRLRSLFHSLSESRQQALLDFAEFLAGKESADRAVAPPAEPLPIPRPAQENVVKAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QRLMQTYPMLDRNRIFHEASGQMTRHLVHGVAAAEAIDELERIFARQYQQHLESLTKDIE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AS
CC
>Mature Secondary Structure 
PDGKRLRSLFHSLSESRQQALLDFAEFLAGKESADRAVAPPAEPLPIPRPAQENVVKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QRLMQTYPMLDRNRIFHEASGQMTRHLVHGVAAAEAIDELERIFARQYQQHLESLTKDIE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA