Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317732

Identifier: 74317732

GI number: 74317732

Start: 1802012

End: 1802422

Strand: Direct

Name: 74317732

Synonym: Tbd_1714

Alternate gene names: NA

Gene position: 1802012-1802422 (Clockwise)

Preceding gene: 74317718

Following gene: 74317733

Centisome position: 61.93

GC content: 61.07

Gene sequence:

>411_bases
ATGCATTACACGCGCGACAACATGGCCGGCCTTTTGCGCAGCCACGACATCAATCCGACCCACCAGCGGATCGAGATCGC
GCACGCCCTGTTCTCGCGCCACGAGCATCTTTCGGCGGACCAGGTCATGGCGATCGTCAATACGCGCCACTCCGAAACCT
CGAAGGCGACGGTCTACAACACGCTCAAGCTGTTTCTCGAGAAAGGCCTGGTGCGCGAGGTGATCGTCGACCCGAGCAAG
GTGTTCTTCGACCCCAACACGACGCCGCACCATCACATCTACGAGATCGACAGCGGAAAGCTGTCCGACATCGACGCCGA
ACACATCCAGATATCGGGCCTGCCTCCTCTTCCCCCGGACATGGTGACGGAAGGCATCGACCTGATCGTGCGCGTGCGCC
GCAAGGCCTGA

Upstream 100 bases:

>100_bases
CGTTTTGCCCTGGATGGGCGTCCGTTCGGGGTTTTCCGAGCCCGATCAAACCCATTCCGGGAATTAGACAAAGTCCAGAT
TGCTGATTATCATAAGGCGC

Downstream 100 bases:

>100_bases
CTCGGCCTCGCGCGGCAACCGGTTCAGCGAACCGTCCCGCGCCGTCGGACCCGTCTTCGCTTCACGCCGGAGCCCCGATG
AAACGCGTACACGTCGCCCC

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: Ferric Uptake Regulator Fur Family; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Ferric Uptake Regulator; Iron Response Regulator; Ferric Uptake Regulation Protein; Fe2+/Zn2+ Uptake Regulation Protein; Fur Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Ferric Uptake Regulator FUR Family; Transcriptional Regulator; Ferric Uptake Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Iron Response Regulator Irr; Transcription Regulator; Iron Transcriptional Regulator Protein; Ferric Uptake Regulation Protein Fur

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHYTRDNMAGLLRSHDINPTHQRIEIAHALFSRHEHLSADQVMAIVNTRHSETSKATVYNTLKLFLEKGLVREVIVDPSK
VFFDPNTTPHHHIYEIDSGKLSDIDAEHIQISGLPPLPPDMVTEGIDLIVRVRRKA

Sequences:

>Translated_136_residues
MHYTRDNMAGLLRSHDINPTHQRIEIAHALFSRHEHLSADQVMAIVNTRHSETSKATVYNTLKLFLEKGLVREVIVDPSK
VFFDPNTTPHHHIYEIDSGKLSDIDAEHIQISGLPPLPPDMVTEGIDLIVRVRRKA
>Mature_136_residues
MHYTRDNMAGLLRSHDINPTHQRIEIAHALFSRHEHLSADQVMAIVNTRHSETSKATVYNTLKLFLEKGLVREVIVDPSK
VFFDPNTTPHHHIYEIDSGKLSDIDAEHIQISGLPPLPPDMVTEGIDLIVRVRRKA

Specific function: Unknown

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15475; Mature: 15475

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYTRDNMAGLLRSHDINPTHQRIEIAHALFSRHEHLSADQVMAIVNTRHSETSKATVYN
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH
TLKLFLEKGLVREVIVDPSKVFFDPNTTPHHHIYEIDSGKLSDIDAEHIQISGLPPLPPD
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHH
MVTEGIDLIVRVRRKA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHYTRDNMAGLLRSHDINPTHQRIEIAHALFSRHEHLSADQVMAIVNTRHSETSKATVYN
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH
TLKLFLEKGLVREVIVDPSKVFFDPNTTPHHHIYEIDSGKLSDIDAEHIQISGLPPLPPD
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHH
MVTEGIDLIVRVRRKA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA