| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is tatC [H]
Identifier: 74317720
GI number: 74317720
Start: 1793919
End: 1794728
Strand: Reverse
Name: tatC [H]
Synonym: Tbd_1702
Alternate gene names: 74317720
Gene position: 1794728-1793919 (Counterclockwise)
Preceding gene: 74317721
Following gene: 74317719
Centisome position: 61.68
GC content: 61.11
Gene sequence:
>810_bases ATGAGCGCGCAGGGAGATACCTTCATTTCGCATCTGATCGAGATGCGCGATCGGCTGTTGCGCGCGGTCATTGCGATCGT CGTCGTCTTCATCGCCTTGTTCCCGTGGGCCCAGGACCTGTATGCCGTGCTGGCGCAACCGCTTCTGTCGGCCCTCCCCG AGGGCGGGCAGATGATCGCGACCGAGGTTACGACGCCGTTCTTCGTGCCGGTGAAGGTCACGCTCATGACGGCGTTCCTG TTGGCGATGCCGTGGGTGTTCTATCAGATATGGGCCTTCGTCGCGCCCGGTCTGTATCAGCACGAAAAGCGTATCGGCAT CCCGCTGGTGGTGGCCAGCGTGCTGCTGTTCCTGCTCGGCATGGCCTTCGCGTATTTCCTTGTCTTTCCCGTGGTGTTCG GCTTCATCGTCGGGATCGCGCCGGCCGGCGTTGCGGTGATGACCGACATCGGCAAATACCTCGATTTCGTGCTCACGCTG TTCATGGCCTTCGGGATCACCTTCGAGGTGCCCGTGGCGGTCGTGCTGCTGGTCAAGATGGGCATGGTGTCGGTCGCGAA GCTGCGGGAGATCCGTCCCTACGTGATCGTCGGCGCCTTCGTTATCGGCGCGATCTTCACCCCGCCTGACGTGATCTCTC AGTTCATGCTCGCAGTGCCCGTATGGCTTTTGTATGAACTCGGCATTCTGGTCGCGGCGCTGATTACCAAACCTCAGCCG GAAGCCGAGTCCGATTACACACCGCTGTCGGAATCCGCGCTCGACGAAGAGCTCGACCGGATCGAACGCGAGTCGACCGA CAACAAGTAG
Upstream 100 bases:
>100_bases AGCCGGCTCAGCCGGACGTTAGGCAGCAGACTCTGCCGCTTGAAGAACCCGATCAGAACCGGGCGGCAGGCGAGCCGTCG TCCACCAGCACCAGACCCGC
Downstream 100 bases:
>100_bases CGCACGCTAACGGGGCGCATTTTCGCATTCACGCACTTCGGCGGTGCAGTGCGCACGGACTTAGGGCGTTCTTCCCGCCC CGTAAAGGCCCATCCAGGCT
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSAQGDTFISHLIEMRDRLLRAVIAIVVVFIALFPWAQDLYAVLAQPLLSALPEGGQMIATEVTTPFFVPVKVTLMTAFL LAMPWVFYQIWAFVAPGLYQHEKRIGIPLVVASVLLFLLGMAFAYFLVFPVVFGFIVGIAPAGVAVMTDIGKYLDFVLTL FMAFGITFEVPVAVVLLVKMGMVSVAKLREIRPYVIVGAFVIGAIFTPPDVISQFMLAVPVWLLYELGILVAALITKPQP EAESDYTPLSESALDEELDRIERESTDNK
Sequences:
>Translated_269_residues MSAQGDTFISHLIEMRDRLLRAVIAIVVVFIALFPWAQDLYAVLAQPLLSALPEGGQMIATEVTTPFFVPVKVTLMTAFL LAMPWVFYQIWAFVAPGLYQHEKRIGIPLVVASVLLFLLGMAFAYFLVFPVVFGFIVGIAPAGVAVMTDIGKYLDFVLTL FMAFGITFEVPVAVVLLVKMGMVSVAKLREIRPYVIVGAFVIGAIFTPPDVISQFMLAVPVWLLYELGILVAALITKPQP EAESDYTPLSESALDEELDRIERESTDNK >Mature_268_residues SAQGDTFISHLIEMRDRLLRAVIAIVVVFIALFPWAQDLYAVLAQPLLSALPEGGQMIATEVTTPFFVPVKVTLMTAFLL AMPWVFYQIWAFVAPGLYQHEKRIGIPLVVASVLLFLLGMAFAYFLVFPVVFGFIVGIAPAGVAVMTDIGKYLDFVLTLF MAFGITFEVPVAVVLLVKMGMVSVAKLREIRPYVIVGAFVIGAIFTPPDVISQFMLAVPVWLLYELGILVAALITKPQPE AESDYTPLSESALDEELDRIERESTDNK
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=249, Percent_Identity=51.4056224899598, Blast_Score=276, Evalue=8e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 29665; Mature: 29534
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQGDTFISHLIEMRDRLLRAVIAIVVVFIALFPWAQDLYAVLAQPLLSALPEGGQMIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TEVTTPFFVPVKVTLMTAFLLAMPWVFYQIWAFVAPGLYQHEKRIGIPLVVASVLLFLLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH MAFAYFLVFPVVFGFIVGIAPAGVAVMTDIGKYLDFVLTLFMAFGITFEVPVAVVLLVKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GMVSVAKLREIRPYVIVGAFVIGAIFTPPDVISQFMLAVPVWLLYELGILVAALITKPQP HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAESDYTPLSESALDEELDRIERESTDNK CCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SAQGDTFISHLIEMRDRLLRAVIAIVVVFIALFPWAQDLYAVLAQPLLSALPEGGQMIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE TEVTTPFFVPVKVTLMTAFLLAMPWVFYQIWAFVAPGLYQHEKRIGIPLVVASVLLFLLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH MAFAYFLVFPVVFGFIVGIAPAGVAVMTDIGKYLDFVLTLFMAFGITFEVPVAVVLLVKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GMVSVAKLREIRPYVIVGAFVIGAIFTPPDVISQFMLAVPVWLLYELGILVAALITKPQP HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAESDYTPLSESALDEELDRIERESTDNK CCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA