| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317668
Identifier: 74317668
GI number: 74317668
Start: 1734281
End: 1734934
Strand: Direct
Name: 74317668
Synonym: Tbd_1650
Alternate gene names: NA
Gene position: 1734281-1734934 (Clockwise)
Preceding gene: 74317667
Following gene: 74317674
Centisome position: 59.6
GC content: 60.86
Gene sequence:
>654_bases ATGAAGCTTCGCCCCCTACTCGTTGCGTCCGCCCTTTTCACCGCAGTCGCCCTGTCGGCGCCGGCCGTCGCACTCGACGT CAAGATCACGGCCGATCTACCTTCCGTCGACGTCATGCACGGCGGGCAAAAGGTCACGATCATGCGTAACCAGGACGAGA AGAACACGATCAATCCCGACTTTGCGAAAACCTCGCGCAAGTGCCCGCCATTCTGCATCCAGCCCGGCCAGCTCGCGCCC GGCGTCGACACGATCGGCGAAGTCGAGCTCATCCACTACATCAAGAAGATGAGCGACGGCGACAAGAGCATCATGGTCGT CGACTCGCGTACCCCGGACTGGGTCGAGAAGGGAACGATCCCCGGCGCCGTCAACATCCCCTGGGACAAGCTGAATATCG GGAAATCCGACCCGATGACGGTCCAGGACATCCTCGAAAAGCATTTCGGCGTGCGCAACCAGGACGGCTTCTACATGTTC GATAACGCCAAGACCGTCGTGATGTTCTGCAACGGCCCGTGGTGCGGCCAGTCGCCGACGAACATCAAGGGACTGCTCAA GATCGGCTACCCGGCCGACAAGATCAAGTGGTATCGCGGCGGGATGCAGGACTGGGAGGTGCTGGGACTGACGACGGTCA AGCCGGTCAACTAG
Upstream 100 bases:
>100_bases AGGAAACCACCGCCGCGCAAGGCGCACCAGCGAAACCCGCAGAAGAACCCGCGTGCGATCAATAGCACTGCACACCGATA CCAATTCAGGAGACACCCCA
Downstream 100 bases:
>100_bases CGGAAGACGACGACCGCGGCAACGCAAAAACGGGGCATCGCGCCCCGTTTTCTTTTGCTAGGCGGCCGGATGCCTGTCCG ACATGCAGCGCCGGCTATAC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Sulfur Transferase Periplasm; Rhodanese-Related Sulfurtransferase
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKLRPLLVASALFTAVALSAPAVALDVKITADLPSVDVMHGGQKVTIMRNQDEKNTINPDFAKTSRKCPPFCIQPGQLAP GVDTIGEVELIHYIKKMSDGDKSIMVVDSRTPDWVEKGTIPGAVNIPWDKLNIGKSDPMTVQDILEKHFGVRNQDGFYMF DNAKTVVMFCNGPWCGQSPTNIKGLLKIGYPADKIKWYRGGMQDWEVLGLTTVKPVN
Sequences:
>Translated_217_residues MKLRPLLVASALFTAVALSAPAVALDVKITADLPSVDVMHGGQKVTIMRNQDEKNTINPDFAKTSRKCPPFCIQPGQLAP GVDTIGEVELIHYIKKMSDGDKSIMVVDSRTPDWVEKGTIPGAVNIPWDKLNIGKSDPMTVQDILEKHFGVRNQDGFYMF DNAKTVVMFCNGPWCGQSPTNIKGLLKIGYPADKIKWYRGGMQDWEVLGLTTVKPVN >Mature_217_residues MKLRPLLVASALFTAVALSAPAVALDVKITADLPSVDVMHGGQKVTIMRNQDEKNTINPDFAKTSRKCPPFCIQPGQLAP GVDTIGEVELIHYIKKMSDGDKSIMVVDSRTPDWVEKGTIPGAVNIPWDKLNIGKSDPMTVQDILEKHFGVRNQDGFYMF DNAKTVVMFCNGPWCGQSPTNIKGLLKIGYPADKIKWYRGGMQDWEVLGLTTVKPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23887; Mature: 23887
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPLLVASALFTAVALSAPAVALDVKITADLPSVDVMHGGQKVTIMRNQDEKNTINPD CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCEEEEEEECCCCCCCCCCC FAKTSRKCPPFCIQPGQLAPGVDTIGEVELIHYIKKMSDGDKSIMVVDSRTPDWVEKGTI HHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCC PGAVNIPWDKLNIGKSDPMTVQDILEKHFGVRNQDGFYMFDNAKTVVMFCNGPWCGQSPT CCEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC NIKGLLKIGYPADKIKWYRGGMQDWEVLGLTTVKPVN CCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKLRPLLVASALFTAVALSAPAVALDVKITADLPSVDVMHGGQKVTIMRNQDEKNTINPD CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCEEEEEEECCCCCCCCCCC FAKTSRKCPPFCIQPGQLAPGVDTIGEVELIHYIKKMSDGDKSIMVVDSRTPDWVEKGTI HHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCC PGAVNIPWDKLNIGKSDPMTVQDILEKHFGVRNQDGFYMFDNAKTVVMFCNGPWCGQSPT CCEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC NIKGLLKIGYPADKIKWYRGGMQDWEVLGLTTVKPVN CCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA