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The map label for this gene is flgD [H]

Identifier: 74317653

GI number: 74317653

Start: 1721320

End: 1721985

Strand: Reverse

Name: flgD [H]

Synonym: Tbd_1635

Alternate gene names: 74317653

Gene position: 1721985-1721320 (Counterclockwise)

Preceding gene: 74317654

Following gene: 74317652

Centisome position: 59.18

GC content: 64.86

Gene sequence:

>666_bases
ATGAGTACGGTACAAGACGCGAGCTCGGTCGGCAGCCTGTTCGGCGCCGAAGCGGCCAAGACTTCAAAAAGCGGGTCGAG
CGACACGCAGGACCGCTTCCTGAGTCTCCTGGTCGCGCAGATGAAGAACCAGGATCCGCTCAATCCGCTCGACAACGCCG
AGGTCACGAGCCAGATGGCGCAGCTGTCGACGGTCGAGGGCATCGAGAACATGAACAAGAGCCTCGAAGCGCTGGCATCG
AGCATGGGCGCGAGCCAGATGTCGCAGGCGGCCAACCTGATCGGTCACGCCGTGCTCGTGCCGGGCAATGCGGTCGGTCC
GGGCCAGCTCGAGAACCTCATGGGATTCGAACTGACGCGACCGGCCGACAAGGTCACGCTCGACATCCATGATGCGGGCG
GCAACCTTGTTCGCAGCGTCGACCTCGGCCCGCGCGATGCGGGTGTCAACGTCGTCGCCTGGGACGGGTTGACGGGCAGC
GGCGCCGTCGCACCGGCCGGCGCCTACAGCTTCAAGGTCAGCGCCGTGCAAGGCGGTCAGGCGCAGAGCAGCATCGCGCT
CAACGTCGGCCTGGTGAACAGCGTGTCGCAGAACAGCGAGGGCGTGCAACTCAATCTGGCAGGAAACGGCAGCGTCGGCT
ACGCCGACATTCGAGAGATCTTCTGA

Upstream 100 bases:

>100_bases
ACCAGTCCAACGTCGAGATGATGAACACCACCAAGACGCTGTTGCTGAAGACGCTGAACCTGGGCAGCTGACCCGCCTGA
AACCCTCACGAGGACACACC

Downstream 100 bases:

>100_bases
TCCCGCAAGGCGGCAGCAGGCTGCCGGTCACCACAACAAGGAGCACAACATGAGTTTTCAGCAGGGTTTGAGCGGCCTCA
ACGCCGCCGCCAAAAATCTG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSTVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMAQLSTVEGIENMNKSLEALAS
SMGASQMSQAANLIGHAVLVPGNAVGPGQLENLMGFELTRPADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGS
GAVAPAGAYSFKVSAVQGGQAQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF

Sequences:

>Translated_221_residues
MSTVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMAQLSTVEGIENMNKSLEALAS
SMGASQMSQAANLIGHAVLVPGNAVGPGQLENLMGFELTRPADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGS
GAVAPAGAYSFKVSAVQGGQAQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF
>Mature_220_residues
STVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMAQLSTVEGIENMNKSLEALASS
MGASQMSQAANLIGHAVLVPGNAVGPGQLENLMGFELTRPADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGSG
AVAPAGAYSFKVSAVQGGQAQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=204, Percent_Identity=42.6470588235294, Blast_Score=157, Evalue=7e-40,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 22505; Mature: 22374

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMA
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
QLSTVEGIENMNKSLEALASSMGASQMSQAANLIGHAVLVPGNAVGPGQLENLMGFELTR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHCCEECC
PADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGSGAVAPAGAYSFKVSAVQGGQ
CCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
AQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF
CCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCCHHHHHHCC
>Mature Secondary Structure 
STVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
QLSTVEGIENMNKSLEALASSMGASQMSQAANLIGHAVLVPGNAVGPGQLENLMGFELTR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHCCEECC
PADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGSGAVAPAGAYSFKVSAVQGGQ
CCCEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
AQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF
CCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]