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The map label for this gene is flgF [H]

Identifier: 74317651

GI number: 74317651

Start: 1719287

End: 1720027

Strand: Reverse

Name: flgF [H]

Synonym: Tbd_1633

Alternate gene names: 74317651

Gene position: 1720027-1719287 (Counterclockwise)

Preceding gene: 74317652

Following gene: 74317650

Centisome position: 59.11

GC content: 67.75

Gene sequence:

>741_bases
ATGGACCGTCTGATCTACACCGCCATGACCGGCGCCAAGCACGCGCTCGAGCAGCAGGCGACGACTTCGCACAACCTCGC
GAACGCGACGACGACGGGCTTTCGCGCACAGATCGACCAGTTCCGCGCGGTGCCGGTGCAGGGCGCGATCCTGCCGACGC
GGGCCTTCGTCGTCGACTCGACCACGGGCAGCGACTTCCGCTCCGGCGCGATCCAGCACACCGGGCGCGAACTCGACATG
GCCGTGCAGGGCGACGGCTGGATCGCGGTGCAGGCCCCCGATGGCAGCGAGGCCTACACGCGCAACGGCAGCCTCAAGCT
CGACGAGAACGGCGTGCTGCTGACGCGCGACGGGCTTCAGGTGATGGGCGACGGCGGACCGCTCTCGATCCCGCCAGGCC
GTAACGTCGCGGTCGGCAAGGACGGCACGATTTCGCTCGTGCCCGACGGCTCGGCGGCGACAGGCCTGACGTCGATCGGG
CGCATGAAGCTCGTGAACCCGCCGGCAGGCGATCTCGTGCGCGGTGACGACGGCCTGTTCCGCCTCAAGGACGGCGGCGC
GGCCGACGTCGATCCGAAAGTCGCGTTGATCGGCGGGGCGCTCGAGTCGTCCAACGTCAACGTCGTCGACGAGATGGTCA
ACATGATTTCGCTTGCGCGCCAGTTCGACATGCACATGAAGCTCTTGCAGCACGCCGAGAACAACGACAGCAAGGCAGCC
CAGCTGCTGAGCATGAGCTGA

Upstream 100 bases:

>100_bases
CGCGTCTACCAGGCGAACGCACAGACGATCAAGTCGCAGGACGCCGTGCTGCAGACGCTGGTGAATCTGCGTTAACCACG
TGCCGCACTAGGGGGACCGT

Downstream 100 bases:

>100_bases
GCCCGGCGGCAACGCCTTTCGACCAATTGAAGGAGCCGAGATGATTCGCTCGCTATGGATTGCCAAGACCGGTCTGGATG
CGCAACAGACGCAGATGGAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAVPVQGAILPTRAFVVDSTTGSDFRSGAIQHTGRELDM
AVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDGLQVMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIG
RMKLVNPPAGDLVRGDDGLFRLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAA
QLLSMS

Sequences:

>Translated_246_residues
MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAVPVQGAILPTRAFVVDSTTGSDFRSGAIQHTGRELDM
AVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDGLQVMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIG
RMKLVNPPAGDLVRGDDGLFRLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAA
QLLSMS
>Mature_246_residues
MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAVPVQGAILPTRAFVVDSTTGSDFRSGAIQHTGRELDM
AVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDGLQVMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIG
RMKLVNPPAGDLVRGDDGLFRLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAA
QLLSMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=252, Percent_Identity=48.015873015873, Blast_Score=232, Evalue=1e-62,
Organism=Escherichia coli, GI1787318, Length=258, Percent_Identity=29.4573643410853, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25810; Mature: 25810

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAVPVQGAILPTRAFVVDS
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCEEECCEEEEEEC
TTGSDFRSGAIQHTGRELDMAVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDGLQ
CCCCCHHCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCCCEEECCCCEEEEECCEE
VMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIGRMKLVNPPAGDLVRGDDGLF
EEECCCCEECCCCCCEEECCCCEEEEEECCCCCCCHHHCCCEEEECCCCCCEEECCCCEE
RLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAA
EECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QLLSMS
HHCCCC
>Mature Secondary Structure
MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAVPVQGAILPTRAFVVDS
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCEEECCEEEEEEC
TTGSDFRSGAIQHTGRELDMAVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDGLQ
CCCCCHHCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCCCEEECCCCEEEEECCEE
VMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIGRMKLVNPPAGDLVRGDDGLF
EEECCCCEECCCCCCEEECCCCEEEEEECCCCCCCHHHCCCEEEECCCCCCEEECCCCEE
RLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAA
EECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QLLSMS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]