| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cheZ [H]
Identifier: 74317631
GI number: 74317631
Start: 1695835
End: 1696527
Strand: Reverse
Name: cheZ [H]
Synonym: Tbd_1613
Alternate gene names: 74317631
Gene position: 1696527-1695835 (Counterclockwise)
Preceding gene: 74317632
Following gene: 74317617
Centisome position: 58.3
GC content: 65.22
Gene sequence:
>693_bases GTGGATACGCGATTCGTCGGCACCGATCTGGAGGCCCCGCCGGGGAGCGCCGTCGCGCTACCGCCGGCGGAAAGAGAAAA CCGCGAGCACGACGAGATGCTGGCGCGGGTCGGCCAGATCACGCGCACCTTGCACGAGAGCCTGCGCGAACTCGGGCTCG ACAAGGTCGTGGAAAAGGCGACCAACGATATCCCCGATGTGCGCGAGCGTCTCAACTACGTCGCCCGCATGACCGAGCAG GCTGCCCAGCGCGTGCTCAATGCCACCGATGCCGCGATTCCGATGCAGGAGCGCATCGACGCCGGCGCCGACGAGGTGCT CAGGGGCTGGCGTGCCACGCTCGCCGCGCCTTTTTCCGAGAGCGGCTACCGTGACATGGCGACGCTGACCATGCAGTGCC TGATCGACATGCGCAACGACACGAGCTCGACCAAGCAGCAATTGCTCGACATCATGATGGCCCAGGATTTCCAGGACCTC ACCGGCCAGGTGATCCGCAAGGTGACCGAACTCGCGCACGGCCTCGAGCAGCAACTGGTGCAGCTGCTGCTCGATTATTC CCCGGCGGAAGTGAAGCGCGAAGTCAGCGTCGGCAGCGGGCTTCTCAACGGGCCGCAGATCAACCCGCACAAGAGCGACG TCGTCGCCGATCAGAGCCAGGTCGACGACCTTCTCGACAGCCTCGGCTTCTGA
Upstream 100 bases:
>100_bases CAGGCCGGCGCCAACGGCTACGTCGTCAAACCCTTCACGGCCGCGACGCTCGACGAAAAACTCACCAAGATATTCGAAAA ACTCGAAAAAGGCGCCTGAC
Downstream 100 bases:
>100_bases GCCGTCCTTCGGCGCGAGGCTTGCCTCGCGTGTCTCGCTACACCCTTGTTTCAACCCTTTTCCGTGGCGCCTAGTGAGGA CGCAGGGTGCGGACGACGCT
Product: chemotaxis regulator CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MDTRFVGTDLEAPPGSAVALPPAERENREHDEMLARVGQITRTLHESLRELGLDKVVEKATNDIPDVRERLNYVARMTEQ AAQRVLNATDAAIPMQERIDAGADEVLRGWRATLAAPFSESGYRDMATLTMQCLIDMRNDTSSTKQQLLDIMMAQDFQDL TGQVIRKVTELAHGLEQQLVQLLLDYSPAEVKREVSVGSGLLNGPQINPHKSDVVADQSQVDDLLDSLGF
Sequences:
>Translated_230_residues MDTRFVGTDLEAPPGSAVALPPAERENREHDEMLARVGQITRTLHESLRELGLDKVVEKATNDIPDVRERLNYVARMTEQ AAQRVLNATDAAIPMQERIDAGADEVLRGWRATLAAPFSESGYRDMATLTMQCLIDMRNDTSSTKQQLLDIMMAQDFQDL TGQVIRKVTELAHGLEQQLVQLLLDYSPAEVKREVSVGSGLLNGPQINPHKSDVVADQSQVDDLLDSLGF >Mature_230_residues MDTRFVGTDLEAPPGSAVALPPAERENREHDEMLARVGQITRTLHESLRELGLDKVVEKATNDIPDVRERLNYVARMTEQ AAQRVLNATDAAIPMQERIDAGADEVLRGWRATLAAPFSESGYRDMATLTMQCLIDMRNDTSSTKQQLLDIMMAQDFQDL TGQVIRKVTELAHGLEQQLVQLLLDYSPAEVKREVSVGSGLLNGPQINPHKSDVVADQSQVDDLLDSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=213, Percent_Identity=45.5399061032864, Blast_Score=175, Evalue=3e-45,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 25482; Mature: 25482
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRFVGTDLEAPPGSAVALPPAERENREHDEMLARVGQITRTLHESLRELGLDKVVEKA CCCCCCCCCCCCCCCCEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNDIPDVRERLNYVARMTEQAAQRVLNATDAAIPMQERIDAGADEVLRGWRATLAAPFSE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCC SGYRDMATLTMQCLIDMRNDTSSTKQQLLDIMMAQDFQDLTGQVIRKVTELAHGLEQQLV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLLDYSPAEVKREVSVGSGLLNGPQINPHKSDVVADQSQVDDLLDSLGF HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTRFVGTDLEAPPGSAVALPPAERENREHDEMLARVGQITRTLHESLRELGLDKVVEKA CCCCCCCCCCCCCCCCEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNDIPDVRERLNYVARMTEQAAQRVLNATDAAIPMQERIDAGADEVLRGWRATLAAPFSE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCC SGYRDMATLTMQCLIDMRNDTSSTKQQLLDIMMAQDFQDLTGQVIRKVTELAHGLEQQLV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLLDYSPAEVKREVSVGSGLLNGPQINPHKSDVVADQSQVDDLLDSLGF HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]