Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ylqH [H]

Identifier: 74317614

GI number: 74317614

Start: 1682278

End: 1682652

Strand: Direct

Name: ylqH [H]

Synonym: Tbd_1596

Alternate gene names: 74317614

Gene position: 1682278-1682652 (Clockwise)

Preceding gene: 74317613

Following gene: 74317615

Centisome position: 57.81

GC content: 67.47

Gene sequence:

>375_bases
ATGCCGACGCCTGACACGCAGCCGGCCGCGAGCGGGGATGTCGGCGCGTTATCCGAAGGGGCATCCCTTGGGACAGCGGC
TCTACAGTCCCGGCCTACTCCCCGCGCGTGCGCCGCCCTCGCCTACCGCGGCGGGGACGCGGCGCCGCGCGTCGTCGCCA
AGGGCCGCGGCATCCTGGCTGACAGCATCATCGAAAAAGCCCGCGCGTCGGGCGTGTACGTCCACGAGTCTCGCGAACTG
CTGGCGCTTTTGATGCAGATCGACCTCGACAGCCACATCCCGCCGCAACTGTACATCGCCGTCGCGGAATTGCTGGCGTG
GCTCTATCATCTGGAAGAAACCGGCGACCGACGCCTATCGCATCCTCCCACTTGA

Upstream 100 bases:

>100_bases
CGGCCCGCGGTCGAAACGCTGCTTCAGGATAACCAGGCGCGCCTGCTTTCCCAGATGTCCGCGGCCGGCTGTGCGCTTCA
AGCTTTTGTGGTGCAACACG

Downstream 100 bases:

>100_bases
GCACAATGTCTTCTTCCCCCCCGCAACACGATCTCGGCCACTGCGACGGCGACGACTTCCTCGCGCGTTATACCCTGCAT
TCACGCGCCGAAATCCTTTT

Product: flagellar protein FhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPTPDTQPAASGDVGALSEGASLGTAALQSRPTPRACAALAYRGGDAAPRVVAKGRGILADSIIEKARASGVYVHESREL
LALLMQIDLDSHIPPQLYIAVAELLAWLYHLEETGDRRLSHPPT

Sequences:

>Translated_124_residues
MPTPDTQPAASGDVGALSEGASLGTAALQSRPTPRACAALAYRGGDAAPRVVAKGRGILADSIIEKARASGVYVHESREL
LALLMQIDLDSHIPPQLYIAVAELLAWLYHLEETGDRRLSHPPT
>Mature_123_residues
PTPDTQPAASGDVGALSEGASLGTAALQSRPTPRACAALAYRGGDAAPRVVAKGRGILADSIIEKARASGVYVHESRELL
ALLMQIDLDSHIPPQLYIAVAELLAWLYHLEETGDRRLSHPPT

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 13093; Mature: 12962

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPDTQPAASGDVGALSEGASLGTAALQSRPTPRACAALAYRGGDAAPRVVAKGRGILA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHH
DSIIEKARASGVYVHESRELLALLMQIDLDSHIPPQLYIAVAELLAWLYHLEETGDRRLS
HHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HPPT
CCCC
>Mature Secondary Structure 
PTPDTQPAASGDVGALSEGASLGTAALQSRPTPRACAALAYRGGDAAPRVVAKGRGILA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHH
DSIIEKARASGVYVHESRELLALLMQIDLDSHIPPQLYIAVAELLAWLYHLEETGDRRLS
HHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HPPT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]