| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317602
Identifier: 74317602
GI number: 74317602
Start: 1668793
End: 1669443
Strand: Reverse
Name: 74317602
Synonym: Tbd_1584
Alternate gene names: NA
Gene position: 1669443-1668793 (Counterclockwise)
Preceding gene: 74317603
Following gene: 74317601
Centisome position: 57.37
GC content: 70.66
Gene sequence:
>651_bases ATGAGCACGGCGACGCTCGTTCATATCCCGGCCGGCGGCGCGACCGTCGAGGGCATGCTCGAGATTCCCGATGCGGCCGC GGGCCTCGTGCTCTTCGCCCACGGCAGCGGCTCGTCGCGCCATTCTCCGCGCAACAACTACGTCGCCCGCGTCCTGCGCG ACGCCGGCGTCGGCACGCTGCTGATGGACTTGCTGACGCCCGAGGAGGACCGCGACTATGCGCAGCGCTTCGATATCGCG CTCTTGACCGGGCGGCTGCTCGACGCGGCGCGCTGGGCCGCGACAAATGACGCGACCCGCAGCCTGCCGCTGGGCTTTTT CGGCGCGAGCACCGGGGCGGCCGCCGCGCTCGAGGCCGCTGCGGCGCTCGGTGCGTCGGCGCGAGCGGTCGTCTCGCGCG GCGGGCGCCCGGATCTCGCGAGTGAAGACGCGCTGCGCAAGGTCAGCGCACCGACGCTGCTGCTGGTCGGCGGCTACGAC GACGGCGTGATCGATCTCAATCAGTACGCCTTCGATCGCCTGTGCTGCAAGAAGGAATTCGTCATCGTGCCAGGGGCGAC CCATTTGTTCGAGGAACCCGGCACGCTCGAGGCGGTGGCCGAGCACGCCGCCGGCTGGTTCGCCGAATACCTGCCGACAC GCGACGCCTGA
Upstream 100 bases:
>100_bases GCACGCAGTGCGGTGCGGCGATCGCCGGCCGCTTCGGCGCCTTCATCCACCCCTTCGGCAACCGGCGCATTCCGGTCTCC GTGCACCGCGAGCAGCGGAC
Downstream 100 bases:
>100_bases AACGGACCGGTGACCCGCGTTGGCCGAGGCGCGGGCGGCGTGGCATGATCGGCGCATGTCCGCCGCTCCCCCCTCCGCCA ACGCTGTCTTCGTCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSTATLVHIPAGGATVEGMLEIPDAAAGLVLFAHGSGSSRHSPRNNYVARVLRDAGVGTLLMDLLTPEEDRDYAQRFDIA LLTGRLLDAARWAATNDATRSLPLGFFGASTGAAAALEAAAALGASARAVVSRGGRPDLASEDALRKVSAPTLLLVGGYD DGVIDLNQYAFDRLCCKKEFVIVPGATHLFEEPGTLEAVAEHAAGWFAEYLPTRDA
Sequences:
>Translated_216_residues MSTATLVHIPAGGATVEGMLEIPDAAAGLVLFAHGSGSSRHSPRNNYVARVLRDAGVGTLLMDLLTPEEDRDYAQRFDIA LLTGRLLDAARWAATNDATRSLPLGFFGASTGAAAALEAAAALGASARAVVSRGGRPDLASEDALRKVSAPTLLLVGGYD DGVIDLNQYAFDRLCCKKEFVIVPGATHLFEEPGTLEAVAEHAAGWFAEYLPTRDA >Mature_215_residues STATLVHIPAGGATVEGMLEIPDAAAGLVLFAHGSGSSRHSPRNNYVARVLRDAGVGTLLMDLLTPEEDRDYAQRFDIAL LTGRLLDAARWAATNDATRSLPLGFFGASTGAAAALEAAAALGASARAVVSRGGRPDLASEDALRKVSAPTLLLVGGYDD GVIDLNQYAFDRLCCKKEFVIVPGATHLFEEPGTLEAVAEHAAGWFAEYLPTRDA
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 22608; Mature: 22476
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTATLVHIPAGGATVEGMLEIPDAAAGLVLFAHGSGSSRHSPRNNYVARVLRDAGVGTL CCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHH LMDLLTPEEDRDYAQRFDIALLTGRLLDAARWAATNDATRSLPLGFFGASTGAAAALEAA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH AALGASARAVVSRGGRPDLASEDALRKVSAPTLLLVGGYDDGVIDLNQYAFDRLCCKKEF HHHCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCE VIVPGATHLFEEPGTLEAVAEHAAGWFAEYLPTRDA EEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STATLVHIPAGGATVEGMLEIPDAAAGLVLFAHGSGSSRHSPRNNYVARVLRDAGVGTL CCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHH LMDLLTPEEDRDYAQRFDIALLTGRLLDAARWAATNDATRSLPLGFFGASTGAAAALEAA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH AALGASARAVVSRGGRPDLASEDALRKVSAPTLLLVGGYDDGVIDLNQYAFDRLCCKKEF HHHCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCE VIVPGATHLFEEPGTLEAVAEHAAGWFAEYLPTRDA EEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]