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The map label for this gene is ytxB [H]

Identifier: 74317553

GI number: 74317553

Start: 1620099

End: 1620803

Strand: Reverse

Name: ytxB [H]

Synonym: Tbd_1535

Alternate gene names: 74317553

Gene position: 1620803-1620099 (Counterclockwise)

Preceding gene: 74317554

Following gene: 74317552

Centisome position: 55.7

GC content: 64.26

Gene sequence:

>705_bases
ATGAATGCGCGCGTCGTCGTCAAGGGTCTGGGCTTGATTCTGAGCCTCGCGCTCCTCGGTTACCTGTTCAACGCCAGCGA
CCTCGGCAACAGCGTCAACGAAGCCTGGATCGACGCGCGGGTGCGCGGCCACGGCGTCGAGGGCGCGCTGATGTTCTTGC
TGATGGGGGCGCTGTTCACGGCCATCGGACTGCCGCGGCAGGTCATCGCCTTTCTCGGCGGCTACGCCTTCAACATCGCG
CTCGGTACGCTGCTCGGTGCACTGGCCGCGCTCCTCGGCTGCGCAGTGAGCTTCGCGTATGCGCGCTTCTTCGGCAAGGA
TTTCGTGCGCGCGCGGCTGGGCGCGCGGGCGCGCCGTTTCGACGGCTTCATTCGCGATCACCCGTTCTCGATGACTGTGC
TGATTCGCCTGCTCCCGGTCGGGAGCAATTTGCTGACCAATCTCGCCGCCGGTATCTCGAGCATTCGACCGACGCCTTTC
TTTGCCGGCACGCTGCTCGGCTATGTCCCGCAGACCTTGGTGTTTGCGCTCGTCGGCAGCGGCGTCCATATCGCCCCGAT
GACCAAATTGATTCTGGCGATCGGTTTGTTCGTGGTTTCAAGCGGACTCGGTGTGTATCTCTACCAGCATTTTCGGCGCG
GACCCGGCCTCGACCAGGAAATCGACGCGGCGCTCGAACCCCGGCGGGGGCACGATGTCACGTAG

Upstream 100 bases:

>100_bases
GGTGGGAATCGTCGACCTGTTCGGCGTTGCCTGGCTGCAGCGCCGCGTGCGGCTGCCGCTGATCGAGCCAGACTCCGATC
GCTGACCGGCCGCGTCCGCC

Downstream 100 bases:

>100_bases
TTGCGAACCGGGGGGGCGCGGTTATCTGCTGCTGAGCCTGCTGCTACTGGCGGGCCTGACGATGGTCGCGCTGATGACGC
GGCCGCTCACGCCGATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNARVVVKGLGLILSLALLGYLFNASDLGNSVNEAWIDARVRGHGVEGALMFLLMGALFTAIGLPRQVIAFLGGYAFNIA
LGTLLGALAALLGCAVSFAYARFFGKDFVRARLGARARRFDGFIRDHPFSMTVLIRLLPVGSNLLTNLAAGISSIRPTPF
FAGTLLGYVPQTLVFALVGSGVHIAPMTKLILAIGLFVVSSGLGVYLYQHFRRGPGLDQEIDAALEPRRGHDVT

Sequences:

>Translated_234_residues
MNARVVVKGLGLILSLALLGYLFNASDLGNSVNEAWIDARVRGHGVEGALMFLLMGALFTAIGLPRQVIAFLGGYAFNIA
LGTLLGALAALLGCAVSFAYARFFGKDFVRARLGARARRFDGFIRDHPFSMTVLIRLLPVGSNLLTNLAAGISSIRPTPF
FAGTLLGYVPQTLVFALVGSGVHIAPMTKLILAIGLFVVSSGLGVYLYQHFRRGPGLDQEIDAALEPRRGHDVT
>Mature_234_residues
MNARVVVKGLGLILSLALLGYLFNASDLGNSVNEAWIDARVRGHGVEGALMFLLMGALFTAIGLPRQVIAFLGGYAFNIA
LGTLLGALAALLGCAVSFAYARFFGKDFVRARLGARARRFDGFIRDHPFSMTVLIRLLPVGSNLLTNLAAGISSIRPTPF
FAGTLLGYVPQTLVFALVGSGVHIAPMTKLILAIGLFVVSSGLGVYLYQHFRRGPGLDQEIDAALEPRRGHDVT

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24960; Mature: 24960

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARVVVKGLGLILSLALLGYLFNASDLGNSVNEAWIDARVRGHGVEGALMFLLMGALFT
CCCEEHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIGLPRQVIAFLGGYAFNIALGTLLGALAALLGCAVSFAYARFFGKDFVRARLGARARRF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFIRDHPFSMTVLIRLLPVGSNLLTNLAAGISSIRPTPFFAGTLLGYVPQTLVFALVGS
CCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
GVHIAPMTKLILAIGLFVVSSGLGVYLYQHFRRGPGLDQEIDAALEPRRGHDVT
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNARVVVKGLGLILSLALLGYLFNASDLGNSVNEAWIDARVRGHGVEGALMFLLMGALFT
CCCEEHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIGLPRQVIAFLGGYAFNIALGTLLGALAALLGCAVSFAYARFFGKDFVRARLGARARRF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFIRDHPFSMTVLIRLLPVGSNLLTNLAAGISSIRPTPFFAGTLLGYVPQTLVFALVGS
CCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
GVHIAPMTKLILAIGLFVVSSGLGVYLYQHFRRGPGLDQEIDAALEPRRGHDVT
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]