Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317484

Identifier: 74317484

GI number: 74317484

Start: 1550614

End: 1551651

Strand: Reverse

Name: 74317484

Synonym: Tbd_1466

Alternate gene names: NA

Gene position: 1551651-1550614 (Counterclockwise)

Preceding gene: 74317487

Following gene: 74317482

Centisome position: 53.32

GC content: 68.79

Gene sequence:

>1038_bases
ATGCTCGTTTCCGCGCACAGGCCGCTGCCATCGTTCGCCGACAAGGTCGGCTTCCTGCGCGACGCCGCGCATTACCCGGC
GCCGACGCGGCGGGTCGTCACGGTGGAAACGCATGTTTCCTGGGTCTTTCTGACCGACAGTTTCGCCTACAAGCTGAAGA
AGCCGGTGCGTTGCAGCTATCTCGACTTCAGCACCCTCGAGGCACGACGCCGCGACTGCGACGAGGAGGTGCGGCTCAAC
CGGCGGCTCGCGGCTTCGGTCTACCTCGGCGTGCTGCCGCTGGTCTGGCACCGCGAGGGCGGGCTCGGCCTCGGCGGCGA
GGGAGAGACTGTGGAGTGGCTCGTCAAGATGCGACGGCTGCCCGCTTCCCGCATGCTCGACAGCCTGATACGCGAGCGGG
CGGTGAGCGAGGCGCAGATGCGGCAGCTGGCGCGCCTGCTTGCGGCCTTCTATGCCGGCATCGTCCCCGAACCGATGGGC
GCAGCGCGCTATCGGGCGCGGCTGGCGCAGCAGATCGCCGAGCCGCTGCACGAACTGGGTGACGTCGACTTCGGCGTGCC
CCACGCGCGTGCGGTGGGTGTGGCCGACGCGCAGGCCGAATTCGTGCGCCGCGAAGCCGCGCTGCTCGACGAACGCGTCG
CGCGCGGCCGCATCGTCGAGGGCCACGGCGACCTGCGGCCCGAACACGTGTGCCTGCTTGCCGATCCCGTCGTCATCGAT
TGCGTCGAGTTCAAGCGCGACTTCCGGATTCTCGACCCGCTCGACGAACTCGGTTATCTCGCGCTCGAATGCGAGCGTCT
CGGCATGGCGGAAATCGGCCCGTGGCTGTTGATCGGCTACGCCGAAGCGAGCGGCGATACGTGGCCGGCGCCCTTGCTGC
ACTTCTACCAGAGCTGCCGTGCGATGCTGCGCGCCAAGCTCGCGGTCTGGCATCTCAAGGACGATGACGGCCGCCATCCG
CCCGCGAGATGGCCGGCCCTCGCGCACGACTATCTCGAACTGGCCGAGCGCCACATCGCCAGGGCGACGCTGCGCTAA

Upstream 100 bases:

>100_bases
CAAGCATTCGGCGCAGGCCGTTGAACGCATGGCATTTTTTTCGCGGCGCGGGCGGCGGTTCCGGCGGGACCCGCGGCCGC
CCGGGGCCGGCTACTAGATC

Downstream 100 bases:

>100_bases
TCGCCGAGCAGATCGCCGAGCGAGCGTGCTTCGTGCAGCCGCCGGATCGCCTCGGCGAAGAGCGGCGCGATGTCGAGGAT
TTCGACGCGCTCGCCCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MLVSAHRPLPSFADKVGFLRDAAHYPAPTRRVVTVETHVSWVFLTDSFAYKLKKPVRCSYLDFSTLEARRRDCDEEVRLN
RRLAASVYLGVLPLVWHREGGLGLGGEGETVEWLVKMRRLPASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMG
AARYRARLAQQIAEPLHELGDVDFGVPHARAVGVADAQAEFVRREAALLDERVARGRIVEGHGDLRPEHVCLLADPVVID
CVEFKRDFRILDPLDELGYLALECERLGMAEIGPWLLIGYAEASGDTWPAPLLHFYQSCRAMLRAKLAVWHLKDDDGRHP
PARWPALAHDYLELAERHIARATLR

Sequences:

>Translated_345_residues
MLVSAHRPLPSFADKVGFLRDAAHYPAPTRRVVTVETHVSWVFLTDSFAYKLKKPVRCSYLDFSTLEARRRDCDEEVRLN
RRLAASVYLGVLPLVWHREGGLGLGGEGETVEWLVKMRRLPASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMG
AARYRARLAQQIAEPLHELGDVDFGVPHARAVGVADAQAEFVRREAALLDERVARGRIVEGHGDLRPEHVCLLADPVVID
CVEFKRDFRILDPLDELGYLALECERLGMAEIGPWLLIGYAEASGDTWPAPLLHFYQSCRAMLRAKLAVWHLKDDDGRHP
PARWPALAHDYLELAERHIARATLR
>Mature_345_residues
MLVSAHRPLPSFADKVGFLRDAAHYPAPTRRVVTVETHVSWVFLTDSFAYKLKKPVRCSYLDFSTLEARRRDCDEEVRLN
RRLAASVYLGVLPLVWHREGGLGLGGEGETVEWLVKMRRLPASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMG
AARYRARLAQQIAEPLHELGDVDFGVPHARAVGVADAQAEFVRREAALLDERVARGRIVEGHGDLRPEHVCLLADPVVID
CVEFKRDFRILDPLDELGYLALECERLGMAEIGPWLLIGYAEASGDTWPAPLLHFYQSCRAMLRAKLAVWHLKDDDGRHP
PARWPALAHDYLELAERHIARATLR

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 38959; Mature: 38959

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSAHRPLPSFADKVGFLRDAAHYPAPTRRVVTVETHVSWVFLTDSFAYKLKKPVRCSY
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECHHHHHHCCCCEEEC
LDFSTLEARRRDCDEEVRLNRRLAASVYLGVLPLVWHREGGLGLGGEGETVEWLVKMRRL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHC
PASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMGAARYRARLAQQIAEPLHELG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
DVDFGVPHARAVGVADAQAEFVRREAALLDERVARGRIVEGHGDLRPEHVCLLADPVVID
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHH
CVEFKRDFRILDPLDELGYLALECERLGMAEIGPWLLIGYAEASGDTWPAPLLHFYQSCR
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHH
AMLRAKLAVWHLKDDDGRHPPARWPALAHDYLELAERHIARATLR
HHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVSAHRPLPSFADKVGFLRDAAHYPAPTRRVVTVETHVSWVFLTDSFAYKLKKPVRCSY
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECHHHHHHCCCCEEEC
LDFSTLEARRRDCDEEVRLNRRLAASVYLGVLPLVWHREGGLGLGGEGETVEWLVKMRRL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHC
PASRMLDSLIRERAVSEAQMRQLARLLAAFYAGIVPEPMGAARYRARLAQQIAEPLHELG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
DVDFGVPHARAVGVADAQAEFVRREAALLDERVARGRIVEGHGDLRPEHVCLLADPVVID
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHH
CVEFKRDFRILDPLDELGYLALECERLGMAEIGPWLLIGYAEASGDTWPAPLLHFYQSCR
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHH
AMLRAKLAVWHLKDDDGRHPPARWPALAHDYLELAERHIARATLR
HHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]