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The map label for this gene is 74317465

Identifier: 74317465

GI number: 74317465

Start: 1533080

End: 1533649

Strand: Reverse

Name: 74317465

Synonym: Tbd_1447

Alternate gene names: NA

Gene position: 1533649-1533080 (Counterclockwise)

Preceding gene: 74317466

Following gene: 74317463

Centisome position: 52.71

GC content: 65.09

Gene sequence:

>570_bases
ATGAAGACACCGCTGCAGATCACATTCCGCGACATCGAGCCCTCCGAAGCGCTCGAGGCGCACATCCGCGAGAAGGCCGA
CAAGCTCGAGACGTTTTTCCAGCCGATCATGTCCTGCCGCGTGGTGCTCGAAGTGCCGCACCAGCACAAGCATCAGGGCA
AGGTATTCAAGTTGCGGATCGATATCGGCGTGCCGGGAAGCGAGATCGTCGTCAACCGCGATGCGCACGAAGACGTCTAT
GTCGCGCTGCGTGACGCGTTCGACGCCGCGCGGCGCCAGCTCGACGACTATTCGCGGCGGTTGCGCCGTGAGACCAAGAC
CCACGACCGGGAGTTCATCGGCGAGGTCGTCCGTCTCTATCCCGACGAGGGCTACGGTTTTGTGCGCCGCCCGGACGGCG
AGGAGCGGTATTTCAGTGCCGCCAACCTCGTGAATGTCAGGCTCGAGCAGCTCGGCGAGGGCGACGCGGTCAAGTTCATC
GAGGACATGTCGGCAGCCGAAGGCCCGCAGGCCAAGCGCGTGAGCGTCGGTCACCACCAGCTGCCGCCCGGCGGGCCCGA
GGCGGAGTGA

Upstream 100 bases:

>100_bases
AGGAACTCCATTGAGCCGAACCCCTCCGGCCTGAGCACCGCCCGGCCGGGACGAGGGGCCATCGCGCGCCATCTCCGAAT
CTCAAAGCAAGGACGAGACG

Downstream 100 bases:

>100_bases
CACGCGCGCTGCCGGGGCTGCGAGCCGGCTGACGCCGCTCTGCGTCAGTGGCGGCCGAAAAGCCGCGCAGGCGCCGGCTT
ACATCGTGCGCTTCAGCAGC

Product: 30S ribosomal protein S30P / sigma 54 modulation protein

Products: NA

Alternate protein names: SSU Ribosomal Modulation Protein; Cold-Shock Protein; Cold-Shock Domain-Containing Protein; Sigma-54 Modulation Protein; Cold Shock Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKTPLQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVLEVPHQHKHQGKVFKLRIDIGVPGSEIVVNRDAHEDVY
VALRDAFDAARRQLDDYSRRLRRETKTHDREFIGEVVRLYPDEGYGFVRRPDGEERYFSAANLVNVRLEQLGEGDAVKFI
EDMSAAEGPQAKRVSVGHHQLPPGGPEAE

Sequences:

>Translated_189_residues
MKTPLQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVLEVPHQHKHQGKVFKLRIDIGVPGSEIVVNRDAHEDVY
VALRDAFDAARRQLDDYSRRLRRETKTHDREFIGEVVRLYPDEGYGFVRRPDGEERYFSAANLVNVRLEQLGEGDAVKFI
EDMSAAEGPQAKRVSVGHHQLPPGGPEAE
>Mature_189_residues
MKTPLQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVLEVPHQHKHQGKVFKLRIDIGVPGSEIVVNRDAHEDVY
VALRDAFDAARRQLDDYSRRLRRETKTHDREFIGEVVRLYPDEGYGFVRRPDGEERYFSAANLVNVRLEQLGEGDAVKFI
EDMSAAEGPQAKRVSVGHHQLPPGGPEAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21601; Mature: 21601

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPLQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVLEVPHQHKHQGKVFKLRI
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEE
DIGVPGSEIVVNRDAHEDVYVALRDAFDAARRQLDDYSRRLRRETKTHDREFIGEVVRLY
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDEGYGFVRRPDGEERYFSAANLVNVRLEQLGEGDAVKFIEDMSAAEGPQAKRVSVGHHQ
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC
LPPGGPEAE
CCCCCCCCC
>Mature Secondary Structure
MKTPLQITFRDIEPSEALEAHIREKADKLETFFQPIMSCRVVLEVPHQHKHQGKVFKLRI
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEE
DIGVPGSEIVVNRDAHEDVYVALRDAFDAARRQLDDYSRRLRRETKTHDREFIGEVVRLY
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDEGYGFVRRPDGEERYFSAANLVNVRLEQLGEGDAVKFIEDMSAAEGPQAKRVSVGHHQ
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC
LPPGGPEAE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA