Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317427

Identifier: 74317427

GI number: 74317427

Start: 1493551

End: 1494825

Strand: Direct

Name: 74317427

Synonym: Tbd_1409

Alternate gene names: NA

Gene position: 1493551-1494825 (Clockwise)

Preceding gene: 74317426

Following gene: 74317428

Centisome position: 51.33

GC content: 70.04

Gene sequence:

>1275_bases
ATGGCGGCGTCACGCAGCCTATACTCATCGGTCGGGCACTGCCCGGCCCTTTTTATTTTTCAGACATGCATCATGGCGAC
TCCCTTACGTGACATCGAAACCCCGACCCGACCTTCGTCTCGCGCGGGCCTTGCGCCCTTCGCCCTCGGCTTTCGCCCGT
TCTTCCTCTCCGCCGGCATCTACGCCGTGCTCATGATGGGGCTCTGGCTCGCGGTCTTGTCCGGTCACCTGACGCCCGGC
GCGCTCGCGCCGGCGGCCTGGCACGGCCACGAGATGGTCTTCGGCTTCGCCGTCGCCGTGATCGCGGGCTTCCTGCTTAC
CGCGGCGCAGAACTGGACCGGCATCGCGATGCCGTCGGGACGGCCGCTCGTCGTGCTGTTCGTGCTGTGGCTCGCGGGGC
GTCTGAGCTTCCTCGTCCCGGGCCTGCCTGCGCCGCTGGTCGCCGCGATCGACGTCAGCTTCCTGCCCGCGCTCGCGCTC
GCGATCGCGCTGCCCGTCCACCGCGCCCGGCAGCTGCACAACTATCCGTTTCCGGTTCTGCTGCTCGCGCTCGCGGTCGC
GAACGCGCTGGTGCACCTGGCGGCGCTCGGCTGGATCACGGCCAGCGTCAACCTGGGCCTGCATCTGGCCGTGTACGTCG
TGGTCATGATGATCGTTCTGATGGGCGGCCGCGTCATTCCGAGCTTCACCGACAACAAGCTGCGCACGCGCGCGCGCCGC
TGGAAGACGATCGAGCTGCTGGCGCCGTTGTCTGCGCTTGTCGCCCTGCTCGCCGCGCTCGTCGCCCCGTCCGGAACCGT
CACCGCGCTGCTCGCAGCGCTCGCGGCCAGCGTGCACTTCGTGCGTCTCGCCGGCTGGTACACCCCAAAGTTCTGGTCCG
TGCCGCTGCTCTGGATCCTGCACCTCGGCTACGCGTGGATCGCGCTCGGCTTCGCCTTGCTCGCGCTGGCCGCGGCCGGC
TTACCGGGGGCCGCGAGCAGCGCGCTGCACGCCTTCACGGCGGGCGGGATCGGCGTACTGACGCTCGGCATGATGGCGCG
GGTCTCGCTTGGCCACACCGGCCGCATGCTCGAACCGCCGCCGGTGATGACGCTCGCCTTCGTCGCGATCAACCTCGCCG
CGCTCATCCGCGTCGCTCTGCCGCTGGCTTTTCCGGCCTTCCACCTCCCGGGCATGACCGCAGCCGGGCTCGTGTGGATC
GCCGCGTTCGGCCTGTTCGCCGCCGTCTACGCGCCGATGCTGCTGCGCCCCCGCGTCGACGGCAAGCCGGGCTGA

Upstream 100 bases:

>100_bases
CTTCCCCTACGGCTACGTCAAGCAGGCCTGCAAGATCGCAGGCATGAGACGGCCACGGGCCTGGAGCACGGGCTGACCTC
GCATCGGACTGGCGCCGCGC

Downstream 100 bases:

>100_bases
ACCCGCCGCGCATTTGACGCGCCGGCGGCAACCGGTGCACGCTCGGGCTTCTGCCTCGCCGCCGATGCCCATGAACCGCT
TTTTGCTCTGGCTGCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MAASRSLYSSVGHCPALFIFQTCIMATPLRDIETPTRPSSRAGLAPFALGFRPFFLSAGIYAVLMMGLWLAVLSGHLTPG
ALAPAAWHGHEMVFGFAVAVIAGFLLTAAQNWTGIAMPSGRPLVVLFVLWLAGRLSFLVPGLPAPLVAAIDVSFLPALAL
AIALPVHRARQLHNYPFPVLLLALAVANALVHLAALGWITASVNLGLHLAVYVVVMMIVLMGGRVIPSFTDNKLRTRARR
WKTIELLAPLSALVALLAALVAPSGTVTALLAALAASVHFVRLAGWYTPKFWSVPLLWILHLGYAWIALGFALLALAAAG
LPGAASSALHAFTAGGIGVLTLGMMARVSLGHTGRMLEPPPVMTLAFVAINLAALIRVALPLAFPAFHLPGMTAAGLVWI
AAFGLFAAVYAPMLLRPRVDGKPG

Sequences:

>Translated_424_residues
MAASRSLYSSVGHCPALFIFQTCIMATPLRDIETPTRPSSRAGLAPFALGFRPFFLSAGIYAVLMMGLWLAVLSGHLTPG
ALAPAAWHGHEMVFGFAVAVIAGFLLTAAQNWTGIAMPSGRPLVVLFVLWLAGRLSFLVPGLPAPLVAAIDVSFLPALAL
AIALPVHRARQLHNYPFPVLLLALAVANALVHLAALGWITASVNLGLHLAVYVVVMMIVLMGGRVIPSFTDNKLRTRARR
WKTIELLAPLSALVALLAALVAPSGTVTALLAALAASVHFVRLAGWYTPKFWSVPLLWILHLGYAWIALGFALLALAAAG
LPGAASSALHAFTAGGIGVLTLGMMARVSLGHTGRMLEPPPVMTLAFVAINLAALIRVALPLAFPAFHLPGMTAAGLVWI
AAFGLFAAVYAPMLLRPRVDGKPG
>Mature_423_residues
AASRSLYSSVGHCPALFIFQTCIMATPLRDIETPTRPSSRAGLAPFALGFRPFFLSAGIYAVLMMGLWLAVLSGHLTPGA
LAPAAWHGHEMVFGFAVAVIAGFLLTAAQNWTGIAMPSGRPLVVLFVLWLAGRLSFLVPGLPAPLVAAIDVSFLPALALA
IALPVHRARQLHNYPFPVLLLALAVANALVHLAALGWITASVNLGLHLAVYVVVMMIVLMGGRVIPSFTDNKLRTRARRW
KTIELLAPLSALVALLAALVAPSGTVTALLAALAASVHFVRLAGWYTPKFWSVPLLWILHLGYAWIALGFALLALAAAGL
PGAASSALHAFTAGGIGVLTLGMMARVSLGHTGRMLEPPPVMTLAFVAINLAALIRVALPLAFPAFHLPGMTAAGLVWIA
AFGLFAAVYAPMLLRPRVDGKPG

Specific function: Unknown

COG id: COG3213

COG function: function code P; Uncharacterized protein involved in response to NO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44552; Mature: 44421

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASRSLYSSVGHCPALFIFQTCIMATPLRDIETPTRPSSRAGLAPFALGFRPFFLSAGI
CCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
YAVLMMGLWLAVLSGHLTPGALAPAAWHGHEMVFGFAVAVIAGFLLTAAQNWTGIAMPSG
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
RPLVVLFVLWLAGRLSFLVPGLPAPLVAAIDVSFLPALALAIALPVHRARQLHNYPFPVL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LLALAVANALVHLAALGWITASVNLGLHLAVYVVVMMIVLMGGRVIPSFTDNKLRTRARR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WKTIELLAPLSALVALLAALVAPSGTVTALLAALAASVHFVRLAGWYTPKFWSVPLLWIL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HLGYAWIALGFALLALAAAGLPGAASSALHAFTAGGIGVLTLGMMARVSLGHTGRMLEPP
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PVMTLAFVAINLAALIRVALPLAFPAFHLPGMTAAGLVWIAAFGLFAAVYAPMLLRPRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GKPG
CCCC
>Mature Secondary Structure 
AASRSLYSSVGHCPALFIFQTCIMATPLRDIETPTRPSSRAGLAPFALGFRPFFLSAGI
CCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
YAVLMMGLWLAVLSGHLTPGALAPAAWHGHEMVFGFAVAVIAGFLLTAAQNWTGIAMPSG
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
RPLVVLFVLWLAGRLSFLVPGLPAPLVAAIDVSFLPALALAIALPVHRARQLHNYPFPVL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LLALAVANALVHLAALGWITASVNLGLHLAVYVVVMMIVLMGGRVIPSFTDNKLRTRARR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
WKTIELLAPLSALVALLAALVAPSGTVTALLAALAASVHFVRLAGWYTPKFWSVPLLWIL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HLGYAWIALGFALLALAAAGLPGAASSALHAFTAGGIGVLTLGMMARVSLGHTGRMLEPP
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PVMTLAFVAINLAALIRVALPLAFPAFHLPGMTAAGLVWIAAFGLFAAVYAPMLLRPRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GKPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA