| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317395
Identifier: 74317395
GI number: 74317395
Start: 1458090
End: 1458749
Strand: Reverse
Name: 74317395
Synonym: Tbd_1377
Alternate gene names: NA
Gene position: 1458749-1458090 (Counterclockwise)
Preceding gene: 74317396
Following gene: 74317394
Centisome position: 50.13
GC content: 65.3
Gene sequence:
>660_bases ATGAACGAACTGGAGCTTCTGACCTGGCTGCGCGGACCCGGCCTTGCGATTTCGGCCGGCATCTTTCTCGCTGGCGTGCT CTGGCGCCTGCTCGAGGTCTTCCTGCTCGGCCGCCACCGGGACCTCGCGCCGCCGCGGCGGGCGAGGGGTGCGTCGGGCC TGCACACCGTGGTGCGCCGTTCGCTCGCGTCCGAGGGCATGCTCAAGCGCTCGCCGGTGAACTACATCGCCGGCTACGTG TTCCACATCGGTCTCGGGCTCATCGTGTTCTTCGGCATCCCGCACATATTGCTCATCGAGGGCCTCGTCGGGGTCTCATG GCCGGGCCTGCCTTCGGGCGTGATCGAACTCGTGACCGTGCTGACGATGGCGGCGATGGTCGTTCTTCTGGTCGACCGCC TGACCAATCCGGTCAAGCGCTTTCTGAGCGGGTTCGGTGACTGGTTCGGCTGGACCGTCACCTTTCTGCCGGTGCTGACG GGCTGGATGGCGGTGCAGCACCTCGTGCTGCCCTATACCAACCTGCTGGTGCTGCACGTGCTCACCGCCGAAATCCTGCT CGTGGTGCTGCCGTTCAGCAAGCTTTTCCATACCTTCACGCTGTTCGGCTCGCGTTGGTATAACGGCAAGGCCCACGCCC ATCGCGGCGTGCCGGTATGA
Upstream 100 bases:
>100_bases GCGGGCTCGCGACCGGCGCCGCCGTCACGGTCGCCAACCGCGCGAAGAAAAGCGCGGCGCGGGCGTCGCACAGGACGATC ACGGTCGAGGATCTGGAGAA
Downstream 100 bases:
>100_bases AACGCGGAGGGCTGCGGCCACGGCGAACGAAGACCGGCCACGCATGCACGGGCTCAAGGAGAGTGCCACGATGAGTGCGT CACTCGAAAAAGGCATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: HMC operon ORF 5 [H]
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV
Sequences:
>Translated_219_residues MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV >Mature_219_residues MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV
Specific function: HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24217; Mature: 24217
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHH SLASEGMLKRSPVNYIAGYVFHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTV HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLTGWMAVQHLVLPYTNLLVLHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHH SLASEGMLKRSPVNYIAGYVFHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTV HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLTGWMAVQHLVLPYTNLLVLHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8335628 [H]