Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317395

Identifier: 74317395

GI number: 74317395

Start: 1458090

End: 1458749

Strand: Reverse

Name: 74317395

Synonym: Tbd_1377

Alternate gene names: NA

Gene position: 1458749-1458090 (Counterclockwise)

Preceding gene: 74317396

Following gene: 74317394

Centisome position: 50.13

GC content: 65.3

Gene sequence:

>660_bases
ATGAACGAACTGGAGCTTCTGACCTGGCTGCGCGGACCCGGCCTTGCGATTTCGGCCGGCATCTTTCTCGCTGGCGTGCT
CTGGCGCCTGCTCGAGGTCTTCCTGCTCGGCCGCCACCGGGACCTCGCGCCGCCGCGGCGGGCGAGGGGTGCGTCGGGCC
TGCACACCGTGGTGCGCCGTTCGCTCGCGTCCGAGGGCATGCTCAAGCGCTCGCCGGTGAACTACATCGCCGGCTACGTG
TTCCACATCGGTCTCGGGCTCATCGTGTTCTTCGGCATCCCGCACATATTGCTCATCGAGGGCCTCGTCGGGGTCTCATG
GCCGGGCCTGCCTTCGGGCGTGATCGAACTCGTGACCGTGCTGACGATGGCGGCGATGGTCGTTCTTCTGGTCGACCGCC
TGACCAATCCGGTCAAGCGCTTTCTGAGCGGGTTCGGTGACTGGTTCGGCTGGACCGTCACCTTTCTGCCGGTGCTGACG
GGCTGGATGGCGGTGCAGCACCTCGTGCTGCCCTATACCAACCTGCTGGTGCTGCACGTGCTCACCGCCGAAATCCTGCT
CGTGGTGCTGCCGTTCAGCAAGCTTTTCCATACCTTCACGCTGTTCGGCTCGCGTTGGTATAACGGCAAGGCCCACGCCC
ATCGCGGCGTGCCGGTATGA

Upstream 100 bases:

>100_bases
GCGGGCTCGCGACCGGCGCCGCCGTCACGGTCGCCAACCGCGCGAAGAAAAGCGCGGCGCGGGCGTCGCACAGGACGATC
ACGGTCGAGGATCTGGAGAA

Downstream 100 bases:

>100_bases
AACGCGGAGGGCTGCGGCCACGGCGAACGAAGACCGGCCACGCATGCACGGGCTCAAGGAGAGTGCCACGATGAGTGCGT
CACTCGAAAAAGGCATCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: HMC operon ORF 5 [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV
FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT
GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV

Sequences:

>Translated_219_residues
MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV
FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT
GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV
>Mature_219_residues
MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRRSLASEGMLKRSPVNYIAGYV
FHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTVLTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLT
GWMAVQHLVLPYTNLLVLHVLTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV

Specific function: HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24217; Mature: 24217

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRR
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHH
SLASEGMLKRSPVNYIAGYVFHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTV
HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLTGWMAVQHLVLPYTNLLVLHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNELELLTWLRGPGLAISAGIFLAGVLWRLLEVFLLGRHRDLAPPRRARGASGLHTVVRR
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHH
SLASEGMLKRSPVNYIAGYVFHIGLGLIVFFGIPHILLIEGLVGVSWPGLPSGVIELVTV
HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTMAAMVVLLVDRLTNPVKRFLSGFGDWFGWTVTFLPVLTGWMAVQHLVLPYTNLLVLHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAEILLVVLPFSKLFHTFTLFGSRWYNGKAHAHRGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]