Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317389

Identifier: 74317389

GI number: 74317389

Start: 1451736

End: 1453541

Strand: Direct

Name: 74317389

Synonym: Tbd_1371

Alternate gene names: NA

Gene position: 1451736-1453541 (Clockwise)

Preceding gene: 74317388

Following gene: 74317390

Centisome position: 49.89

GC content: 68.94

Gene sequence:

>1806_bases
ATGGCCTCTGTTCCCTCCCTGCGGGCTGCGATGACCGGAGCCGGCGTGCTCGCCGCGAGTCTGGTGCTGGCGAACGCGAG
CGACCGGGAGTCGTCTCGCCCCGGCGAGGCCGCGTTGCTGGCCGCCCAATCACAGTTTTGCACGTCGGTCCGGGGCCGCC
AGGGTGCCCTGTTCGAACAGCTTGCCGCGGCGAAAACCGAGCTCGGGCCTTTTCCGACCGAGCGAGGGGCAGGCGACCCG
GCCTCCTCGGCGGCGCCGCCGCTCTTCGAGAATCTCGGCTCCCTCCACTTCCCGATCACCACGGCCACGTCCGCCGCGCA
GCGCTATTTCGACCAGGGTTTGAAGCTCGCCTACGCGTTCAATCATGCCGAAGCCGCGCGCGCGTTCCGCCACGCGCAAC
GCCTCGATCCGCACTGCCCGCTCTGCTACTGGGGGGAAGCCCTGGTGCTCGGCCCCAACATCAACGCGCCGATGGAGCCG
GCAGCCAACACGGCCGCCCTCGAGGCCCTGCGTCGCGCCCAAGCCCTCGTGGACGTCGCGAACCCGAAGGAACGTGCGCT
CATCGGCGCCCTCGCCCGACGGTACGCGGACGAACCGGACGGGGCGCGTGGCGGCCTAGACGCGGGCTATGCTGATGCGA
TGCGCGCGGTTGCTGCGCGTTACTCGGACGACGCCGACGTCAGCTTGCTGTACGTCGAATCGCTGATGGATCTGTCGCCT
TGGGACTACTGGGAAGCGGCCGGCACCCGGCCCAAGGGGCGTACTGCGGAAATCGTCGCCCTGCTCGAGAAAGTGCTGCA
GAAGCGTCCCGACCATCCCGGTGCGATCCATTTCTACATCCACATGGTCGAAGCGTCGGCCGACCCCGGCCGGGCTCTGC
CCTACGCGAACAGGCTCGGCGACCTGATGCCGGACGCGGGGCATCTCGTCCACATGCCCTTCCACATCTACTACCGCGTC
GGACGTTACAAGGACGCCATCGAAGCCAACCGGCGGGCCGTGGCGGTCGATGAGCGCTACCTCGCCGCGGCTTCACCCAT
CGGCATCTATCCGCTTGCCTACTACCCGCACAACATCCATTCCCTGATGAGTTCGGCACAGATGGCCGGAGACGGTCGAA
GCGCGGTCGCCGCGGCAGAGAAACTCGCGCGCGTCGTCAGCGCCGAGACGGGGCGAAGCATCGCCTGGGTGCAGCCGATC
CTCGTCGCGCCTTACTTCGCCCATGCCCAGTTCAGCCCGCCCGACGTCGCCCTCGCGCAGCCCGACCCCGGGAGCGAGCT
TCCGTATGTGAAAGCGATGTGGCACTACATGCGCGGCGCGGCCTTGGCCTTGCTCGGCAGGCCCGCCGAGGCGCGACGAG
AAGTTGCCGCGATGCGCGACCTCGCCCGCCACCGCGATCTGGCCATGCTGGCGCAAAACGGCGTGCCCGCGCCGGACCTG
ATCGAACTGGCACAGCAGGTGGTGCTCGGCCGGATCGCACAGTCCGGCGGCGACCTCGTCGCCGCGCAACAAATCTTCGA
GCGCGCGGTTGTGCTCGAGGACAAACTCCCCTACTCGGAGCCGCCCTACTGGTACTACCCGGTGCGCCAATCACTCGGCG
CCGTCCTGCTCGAGGCCGGCAGACTCGAAGACGCCGAGAGCGCTTTCCGGACCAGCCTCATGCGCACGCCGAACAGCGGT
TGGGCCCTCTATGGACTGGCGGTCGCTTATGCGCGTCAGGGCAGGCAGGGCGCGGCCGCAGAGGTCCGCGAGCGGTTCGC
GCGGGCCTGGGCCGGCGACGCTGCCCCCGATCTTGCCCGGCTCTAA

Upstream 100 bases:

>100_bases
CGCGGTCACGGCGCCTCGCTCCCTCACCGCCTTGATTGAAGGCCGCGCTGATCTACATAAAGAAGAGCGGGCCGAGAGTC
GGCTCGCCAAGGAGACGGCG

Downstream 100 bases:

>100_bases
CGGTTCGGGTGTTTCGCTCGTTTGAAAGGAGACCACGTCATGAATACAAAAATTCTCACCGCCGCCCTGCTCGGCGCAAG
CCTCTCGGTGCCTGTCGCGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Repeat Protein; Redoxin Domain-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MASVPSLRAAMTGAGVLAASLVLANASDRESSRPGEAALLAAQSQFCTSVRGRQGALFEQLAAAKTELGPFPTERGAGDP
ASSAAPPLFENLGSLHFPITTATSAAQRYFDQGLKLAYAFNHAEAARAFRHAQRLDPHCPLCYWGEALVLGPNINAPMEP
AANTAALEALRRAQALVDVANPKERALIGALARRYADEPDGARGGLDAGYADAMRAVAARYSDDADVSLLYVESLMDLSP
WDYWEAAGTRPKGRTAEIVALLEKVLQKRPDHPGAIHFYIHMVEASADPGRALPYANRLGDLMPDAGHLVHMPFHIYYRV
GRYKDAIEANRRAVAVDERYLAAASPIGIYPLAYYPHNIHSLMSSAQMAGDGRSAVAAAEKLARVVSAETGRSIAWVQPI
LVAPYFAHAQFSPPDVALAQPDPGSELPYVKAMWHYMRGAALALLGRPAEARREVAAMRDLARHRDLAMLAQNGVPAPDL
IELAQQVVLGRIAQSGGDLVAAQQIFERAVVLEDKLPYSEPPYWYYPVRQSLGAVLLEAGRLEDAESAFRTSLMRTPNSG
WALYGLAVAYARQGRQGAAAEVRERFARAWAGDAAPDLARL

Sequences:

>Translated_601_residues
MASVPSLRAAMTGAGVLAASLVLANASDRESSRPGEAALLAAQSQFCTSVRGRQGALFEQLAAAKTELGPFPTERGAGDP
ASSAAPPLFENLGSLHFPITTATSAAQRYFDQGLKLAYAFNHAEAARAFRHAQRLDPHCPLCYWGEALVLGPNINAPMEP
AANTAALEALRRAQALVDVANPKERALIGALARRYADEPDGARGGLDAGYADAMRAVAARYSDDADVSLLYVESLMDLSP
WDYWEAAGTRPKGRTAEIVALLEKVLQKRPDHPGAIHFYIHMVEASADPGRALPYANRLGDLMPDAGHLVHMPFHIYYRV
GRYKDAIEANRRAVAVDERYLAAASPIGIYPLAYYPHNIHSLMSSAQMAGDGRSAVAAAEKLARVVSAETGRSIAWVQPI
LVAPYFAHAQFSPPDVALAQPDPGSELPYVKAMWHYMRGAALALLGRPAEARREVAAMRDLARHRDLAMLAQNGVPAPDL
IELAQQVVLGRIAQSGGDLVAAQQIFERAVVLEDKLPYSEPPYWYYPVRQSLGAVLLEAGRLEDAESAFRTSLMRTPNSG
WALYGLAVAYARQGRQGAAAEVRERFARAWAGDAAPDLARL
>Mature_600_residues
ASVPSLRAAMTGAGVLAASLVLANASDRESSRPGEAALLAAQSQFCTSVRGRQGALFEQLAAAKTELGPFPTERGAGDPA
SSAAPPLFENLGSLHFPITTATSAAQRYFDQGLKLAYAFNHAEAARAFRHAQRLDPHCPLCYWGEALVLGPNINAPMEPA
ANTAALEALRRAQALVDVANPKERALIGALARRYADEPDGARGGLDAGYADAMRAVAARYSDDADVSLLYVESLMDLSPW
DYWEAAGTRPKGRTAEIVALLEKVLQKRPDHPGAIHFYIHMVEASADPGRALPYANRLGDLMPDAGHLVHMPFHIYYRVG
RYKDAIEANRRAVAVDERYLAAASPIGIYPLAYYPHNIHSLMSSAQMAGDGRSAVAAAEKLARVVSAETGRSIAWVQPIL
VAPYFAHAQFSPPDVALAQPDPGSELPYVKAMWHYMRGAALALLGRPAEARREVAAMRDLARHRDLAMLAQNGVPAPDLI
ELAQQVVLGRIAQSGGDLVAAQQIFERAVVLEDKLPYSEPPYWYYPVRQSLGAVLLEAGRLEDAESAFRTSLMRTPNSGW
ALYGLAVAYARQGRQGAAAEVRERFARAWAGDAAPDLARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64773; Mature: 64642

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVPSLRAAMTGAGVLAASLVLANASDRESSRPGEAALLAAQSQFCTSVRGRQGALFEQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LAAAKTELGPFPTERGAGDPASSAAPPLFENLGSLHFPITTATSAAQRYFDQGLKLAYAF
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
NHAEAARAFRHAQRLDPHCPLCYWGEALVLGPNINAPMEPAANTAALEALRRAQALVDVA
CHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
NPKERALIGALARRYADEPDGARGGLDAGYADAMRAVAARYSDDADVSLLYVESLMDLSP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCC
WDYWEAAGTRPKGRTAEIVALLEKVLQKRPDHPGAIHFYIHMVEASADPGRALPYANRLG
CCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHH
DLMPDAGHLVHMPFHIYYRVGRYKDAIEANRRAVAVDERYLAAASPIGIYPLAYYPHNIH
HCCCCCCCEEECCHHEEHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCEEEECCCHHH
SLMSSAQMAGDGRSAVAAAEKLARVVSAETGRSIAWVQPILVAPYFAHAQFSPPDVALAQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCCEEEC
PDPGSELPYVKAMWHYMRGAALALLGRPAEARREVAAMRDLARHRDLAMLAQNGVPAPDL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IELAQQVVLGRIAQSGGDLVAAQQIFERAVVLEDKLPYSEPPYWYYPVRQSLGAVLLEAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHC
RLEDAESAFRTSLMRTPNSGWALYGLAVAYARQGRQGAAAEVRERFARAWAGDAAPDLAR
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHC
L
C
>Mature Secondary Structure 
ASVPSLRAAMTGAGVLAASLVLANASDRESSRPGEAALLAAQSQFCTSVRGRQGALFEQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
LAAAKTELGPFPTERGAGDPASSAAPPLFENLGSLHFPITTATSAAQRYFDQGLKLAYAF
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
NHAEAARAFRHAQRLDPHCPLCYWGEALVLGPNINAPMEPAANTAALEALRRAQALVDVA
CHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
NPKERALIGALARRYADEPDGARGGLDAGYADAMRAVAARYSDDADVSLLYVESLMDLSP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCC
WDYWEAAGTRPKGRTAEIVALLEKVLQKRPDHPGAIHFYIHMVEASADPGRALPYANRLG
CCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHH
DLMPDAGHLVHMPFHIYYRVGRYKDAIEANRRAVAVDERYLAAASPIGIYPLAYYPHNIH
HCCCCCCCEEECCHHEEHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCEEEECCCHHH
SLMSSAQMAGDGRSAVAAAEKLARVVSAETGRSIAWVQPILVAPYFAHAQFSPPDVALAQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCCEEEC
PDPGSELPYVKAMWHYMRGAALALLGRPAEARREVAAMRDLARHRDLAMLAQNGVPAPDL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IELAQQVVLGRIAQSGGDLVAAQQIFERAVVLEDKLPYSEPPYWYYPVRQSLGAVLLEAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHC
RLEDAESAFRTSLMRTPNSGWALYGLAVAYARQGRQGAAAEVRERFARAWAGDAAPDLAR
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA