Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317385

Identifier: 74317385

GI number: 74317385

Start: 1448423

End: 1449160

Strand: Direct

Name: 74317385

Synonym: Tbd_1367

Alternate gene names: NA

Gene position: 1448423-1449160 (Clockwise)

Preceding gene: 74317384

Following gene: 74317387

Centisome position: 49.78

GC content: 63.14

Gene sequence:

>738_bases
ATGAAAAACGGAAACGCTGTTCTCAAAACGGTTCGCGCCGCGCTCGAGCGCGATCCCCGTATCAATCTGCATGTATGGCC
CCTACAACTCGAACTGACCGATGACCACGCCCTCGTCGTCCAGGGCGAGGTGCAGAACATCGCAGCGAAAAAGCGCGCGC
TCGAGGTGGCGGGCGCGATGCCGGAGGTACTCGGCATCGTCGACCGCGTGCAAGTCGCGCCGGCCGAGCACAAAGGCGAC
GGCGAAATACTCGAAGTGCTGATCCGTCTCCTGCTCGATTCAGGCGAATTCAAGAGCTGCACCTTGCGTGCGATCAAGAA
GGGGCAGGACGTTGTGGTTCAGTCGGCCGAGGGCGCCGACTATCCGGGTGGCACCCTCAGGGTGTGGGTCGACGATGGCG
TCATCACGCTCGACGGCTCGCTCATTAGCCTCTCGCACAAGCGCATGGCCGGGGTGCTGGCGTGGTGGGTGCCGGGCTGT
CGCGACGTGCGCAATCTGCTCGAAGTCGAACCGCCCGAGCAGGACAACGACGGCGAGATTAGCGAAGCTCTCGCGCTGGT
CCTCGAACTGGACCCGATGATTTCACGACCGCATCAGATTCGGGTCGGCATCCGCGACAAGGTCGTGACCCTGCAGGGCG
CGGTCGGCACGGAAACGGAAAAAGACCGCGCCGAACAGGACGCGTGGAGCATGTTCAACGTCGGGACCGTCGTCAACCAG
CTGACGGTCAGCCGCTGA

Upstream 100 bases:

>100_bases
CCTCCGGCCGCCGCGGCCGCCGCCTGAGCGATTCACCCCCGCTCCAGGGCCTGCTGGCCACGCCGGCGCGTGTGCTATGT
TGACCTTGGAGGTGTCGCTG

Downstream 100 bases:

>100_bases
CGCCCGGCGGGAGCTCTCCTGCCGATCTAGCCGCTGATGTTCCCGCAGGCAACCGCACTTTGTGTGCCGCTGCCGCGGAC
ATTGACCGCCGCCGGCTGCT

Product: periplasmic or secreted lipoprotein

Products: NA

Alternate protein names: Periplasmic Or Secreted Lipoprotein; Periplasmic Or Secreted Lipoprotein OsmY

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKNGNAVLKTVRAALERDPRINLHVWPLQLELTDDHALVVQGEVQNIAAKKRALEVAGAMPEVLGIVDRVQVAPAEHKGD
GEILEVLIRLLLDSGEFKSCTLRAIKKGQDVVVQSAEGADYPGGTLRVWVDDGVITLDGSLISLSHKRMAGVLAWWVPGC
RDVRNLLEVEPPEQDNDGEISEALALVLELDPMISRPHQIRVGIRDKVVTLQGAVGTETEKDRAEQDAWSMFNVGTVVNQ
LTVSR

Sequences:

>Translated_245_residues
MKNGNAVLKTVRAALERDPRINLHVWPLQLELTDDHALVVQGEVQNIAAKKRALEVAGAMPEVLGIVDRVQVAPAEHKGD
GEILEVLIRLLLDSGEFKSCTLRAIKKGQDVVVQSAEGADYPGGTLRVWVDDGVITLDGSLISLSHKRMAGVLAWWVPGC
RDVRNLLEVEPPEQDNDGEISEALALVLELDPMISRPHQIRVGIRDKVVTLQGAVGTETEKDRAEQDAWSMFNVGTVVNQ
LTVSR
>Mature_245_residues
MKNGNAVLKTVRAALERDPRINLHVWPLQLELTDDHALVVQGEVQNIAAKKRALEVAGAMPEVLGIVDRVQVAPAEHKGD
GEILEVLIRLLLDSGEFKSCTLRAIKKGQDVVVQSAEGADYPGGTLRVWVDDGVITLDGSLISLSHKRMAGVLAWWVPGC
RDVRNLLEVEPPEQDNDGEISEALALVLELDPMISRPHQIRVGIRDKVVTLQGAVGTETEKDRAEQDAWSMFNVGTVVNQ
LTVSR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26797; Mature: 26797

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGNAVLKTVRAALERDPRINLHVWPLQLELTDDHALVVQGEVQNIAAKKRALEVAGAM
CCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCC
PEVLGIVDRVQVAPAEHKGDGEILEVLIRLLLDSGEFKSCTLRAIKKGQDVVVQSAEGAD
HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCC
YPGGTLRVWVDDGVITLDGSLISLSHKRMAGVLAWWVPGCRDVRNLLEVEPPEQDNDGEI
CCCCEEEEEEECCEEEECCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHH
SEALALVLELDPMISRPHQIRVGIRDKVVTLQGAVGTETEKDRAEQDAWSMFNVGTVVNQ
HHHHHHHHHCCHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTVSR
HHCCC
>Mature Secondary Structure
MKNGNAVLKTVRAALERDPRINLHVWPLQLELTDDHALVVQGEVQNIAAKKRALEVAGAM
CCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCC
PEVLGIVDRVQVAPAEHKGDGEILEVLIRLLLDSGEFKSCTLRAIKKGQDVVVQSAEGAD
HHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCC
YPGGTLRVWVDDGVITLDGSLISLSHKRMAGVLAWWVPGCRDVRNLLEVEPPEQDNDGEI
CCCCEEEEEEECCEEEECCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHH
SEALALVLELDPMISRPHQIRVGIRDKVVTLQGAVGTETEKDRAEQDAWSMFNVGTVVNQ
HHHHHHHHHCCHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTVSR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA