| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317362
Identifier: 74317362
GI number: 74317362
Start: 1425549
End: 1426325
Strand: Reverse
Name: 74317362
Synonym: Tbd_1344
Alternate gene names: NA
Gene position: 1426325-1425549 (Counterclockwise)
Preceding gene: 74317363
Following gene: 74317361
Centisome position: 49.02
GC content: 61.39
Gene sequence:
>777_bases TTGGTCAATAATTTGCTCAAAGCGCTAGTTTATGGTTACGTTGTTAACCAAATGAGCACTTCAGAAATTAACATTGTCCT CGAACGCCAGCTGTTGCTACAGTTGGGCGACCGTCTCAAAGGGCTGCGGAAAGCAAATGGGCTTGGAACGGTCGAGATGG CCGCGCGCGTCGGGATTACCCGCAACACGCTGCGAGCGGTCGAAGCCGGCGATCCAGCCCCCTCCTTGGGCACCTACCTG CGCGTAATGTCTGCCTTGGGCATCAGCGGCGAGTTGGCTCTGCTGGCCGGAGACACCCTGCAGCCGGCTCCCGCAGACTC TGCCGCGGCGAGATCTCGACGTACGGCGCCAGTCGTGCAGGTACATATTTCGGCAGACGAAGGCAAGCACCGGCTTCAGG ACTTGCAGAGTCTGGCGCTCCACGAGGAGGCCGTACGGTTGGCCAAGGCCAACCCAACACTGGTGCGGCAGGCCGAGAAC ACCGCCAAGCGCTGGCTCGCCACCGGCGACGCGCGCTCCGCGAGCCTGTGGCTCGAGTGGCTGAATATCCTGGGTTCCGG TTCCTGGCGCAAGGCACTTGGCCGCACTCGACACGCTCAGCAGCTACGGCAAGCCTCGCCCCTCGTCACCGTCCTTCCGG AAGAAACTCGCCAACGCGTCCTGGAGCAAGTAAGGGACCTTGAGAGAGGGGTTGTGATCGGCGGAACTCCAGACACTTCG CAAGACGCCGGATGCTCCAAGGAGAGGCAGCGTCGTGAGAAGAACTCGAGCACATGA
Upstream 100 bases:
>100_bases GGCGGGGACATTCCACCTCGTTGTGGTCGCCGATGAAGGGCGCGCCTCGAAGGAAGTCGCGCTTCCATGTTTCCCGCTGC GCTGACGGCAGGCCGATAAT
Downstream 100 bases:
>100_bases TACGTGCCAGCGGGGATATCACGGACAGTACGAGTTCGTGATCATCGGCAGCCAGTCGATGCTAGGCACCGTGCGGTTGA AGCGCTATTTCCGTAGGAGG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGTVEMAARVGITRNTLRAVEAGDPAPSLGTYL RVMSALGISGELALLAGDTLQPAPADSAAARSRRTAPVVQVHISADEGKHRLQDLQSLALHEEAVRLAKANPTLVRQAEN TAKRWLATGDARSASLWLEWLNILGSGSWRKALGRTRHAQQLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTS QDAGCSKERQRREKNSST
Sequences:
>Translated_258_residues MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGTVEMAARVGITRNTLRAVEAGDPAPSLGTYL RVMSALGISGELALLAGDTLQPAPADSAAARSRRTAPVVQVHISADEGKHRLQDLQSLALHEEAVRLAKANPTLVRQAEN TAKRWLATGDARSASLWLEWLNILGSGSWRKALGRTRHAQQLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTS QDAGCSKERQRREKNSST >Mature_258_residues MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGTVEMAARVGITRNTLRAVEAGDPAPSLGTYL RVMSALGISGELALLAGDTLQPAPADSAAARSRRTAPVVQVHISADEGKHRLQDLQSLALHEEAVRLAKANPTLVRQAEN TAKRWLATGDARSASLWLEWLNILGSGSWRKALGRTRHAQQLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTS QDAGCSKERQRREKNSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28105; Mature: 28105
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGTVEMAARVGIT CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH RNTLRAVEAGDPAPSLGTYLRVMSALGISGELALLAGDTLQPAPADSAAARSRRTAPVVQ HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEE VHISADEGKHRLQDLQSLALHEEAVRLAKANPTLVRQAENTAKRWLATGDARSASLWLEW EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LNILGSGSWRKALGRTRHAQQLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTS HHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCEEECCCCCCC QDAGCSKERQRREKNSST CCCCCCHHHHHHHCCCCC >Mature Secondary Structure MVNNLLKALVYGYVVNQMSTSEINIVLERQLLLQLGDRLKGLRKANGLGTVEMAARVGIT CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH RNTLRAVEAGDPAPSLGTYLRVMSALGISGELALLAGDTLQPAPADSAAARSRRTAPVVQ HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEE VHISADEGKHRLQDLQSLALHEEAVRLAKANPTLVRQAENTAKRWLATGDARSASLWLEW EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LNILGSGSWRKALGRTRHAQQLRQASPLVTVLPEETRQRVLEQVRDLERGVVIGGTPDTS HHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCEEECCCCCCC QDAGCSKERQRREKNSST CCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA