Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317317

Identifier: 74317317

GI number: 74317317

Start: 1370529

End: 1371059

Strand: Direct

Name: 74317317

Synonym: Tbd_1299

Alternate gene names: NA

Gene position: 1370529-1371059 (Clockwise)

Preceding gene: 74317316

Following gene: 74317318

Centisome position: 47.1

GC content: 69.11

Gene sequence:

>531_bases
ATGAGCCTGTCGCCGGCAAAAAGAAAGATCGCCCTCGGCGTCGCGCTCGCGGCGACGCTCGGCGCGACGGTGTGGGTCGG
CGAGCAGGAAGACGCCGCGCCCGAACTCGTCGCGCAGGCGGTGCCGCGGCCTGCCGCCGAGTCGGCCGGGCGGCCGGCGC
CGCCCGCAAGCGGCCCGGCGATCACGCGCGGCGGCCTCAAGCGCGAGATTTCGCGCGAGCCGGTGCCCGACGTCTTCGCC
GCGAAATCCTGGTACGTGCCGCCCCCGGCGCCCAAGTACGTTCCGCCGCCTCCACCCCCGCCGCCCCCCGCGCCGGTGCC
GCCGCCATTGCCCTTCGTCTATCTCGGCAAGCTCGTCGACAACGGTGAAATCACGGTTTTCGTCGTGTTCAAGGGCCGCA
ATCTCGCCGTCAAGGCCAACGAGGTGATCGATTCGACCTACCGGATCGACAGTGTCGACGCACGCAGCATGGCGCTGACC
TACCTCCCCCTGGACATGAAGCAAACCCTCTCCCTCGGAGAAAGAAATTGA

Upstream 100 bases:

>100_bases
CGAGCCTGTCGCTCGATGCGCTCGCGATCCGCAAGGACAAGATCGACGACGGCGAGGTCCGGGCGGACATCCGGATGACG
CTTTATCTGGAGCGTGCGTC

Downstream 100 bases:

>100_bases
AAACGAAGCACGTCGTTGTGAGTCTTGTCTGTGTTCTGGGCCTTTCGGGCTGCGCTGCCGACCGCGCCTTCACCCGCGGC
AAGGGCATGCTGGAGCAGGG

Product: prolin-rich transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFA
AKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALT
YLPLDMKQTLSLGERN

Sequences:

>Translated_176_residues
MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFA
AKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALT
YLPLDMKQTLSLGERN
>Mature_175_residues
SLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFAA
KSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTY
LPLDMKQTLSLGERN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18602; Mature: 18471

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPA
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCC
ITRGGLKREISREPVPDVFAAKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVD
CCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC
NGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTYLPLDMKQTLSLGERN
CCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCC
>Mature Secondary Structure 
SLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPA
CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCC
ITRGGLKREISREPVPDVFAAKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVD
CCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC
NGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTYLPLDMKQTLSLGERN
CCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA