| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317317
Identifier: 74317317
GI number: 74317317
Start: 1370529
End: 1371059
Strand: Direct
Name: 74317317
Synonym: Tbd_1299
Alternate gene names: NA
Gene position: 1370529-1371059 (Clockwise)
Preceding gene: 74317316
Following gene: 74317318
Centisome position: 47.1
GC content: 69.11
Gene sequence:
>531_bases ATGAGCCTGTCGCCGGCAAAAAGAAAGATCGCCCTCGGCGTCGCGCTCGCGGCGACGCTCGGCGCGACGGTGTGGGTCGG CGAGCAGGAAGACGCCGCGCCCGAACTCGTCGCGCAGGCGGTGCCGCGGCCTGCCGCCGAGTCGGCCGGGCGGCCGGCGC CGCCCGCAAGCGGCCCGGCGATCACGCGCGGCGGCCTCAAGCGCGAGATTTCGCGCGAGCCGGTGCCCGACGTCTTCGCC GCGAAATCCTGGTACGTGCCGCCCCCGGCGCCCAAGTACGTTCCGCCGCCTCCACCCCCGCCGCCCCCCGCGCCGGTGCC GCCGCCATTGCCCTTCGTCTATCTCGGCAAGCTCGTCGACAACGGTGAAATCACGGTTTTCGTCGTGTTCAAGGGCCGCA ATCTCGCCGTCAAGGCCAACGAGGTGATCGATTCGACCTACCGGATCGACAGTGTCGACGCACGCAGCATGGCGCTGACC TACCTCCCCCTGGACATGAAGCAAACCCTCTCCCTCGGAGAAAGAAATTGA
Upstream 100 bases:
>100_bases CGAGCCTGTCGCTCGATGCGCTCGCGATCCGCAAGGACAAGATCGACGACGGCGAGGTCCGGGCGGACATCCGGATGACG CTTTATCTGGAGCGTGCGTC
Downstream 100 bases:
>100_bases AAACGAAGCACGTCGTTGTGAGTCTTGTCTGTGTTCTGGGCCTTTCGGGCTGCGCTGCCGACCGCGCCTTCACCCGCGGC AAGGGCATGCTGGAGCAGGG
Product: prolin-rich transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFA AKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALT YLPLDMKQTLSLGERN
Sequences:
>Translated_176_residues MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFA AKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALT YLPLDMKQTLSLGERN >Mature_175_residues SLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPAITRGGLKREISREPVPDVFAA KSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVDNGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTY LPLDMKQTLSLGERN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18602; Mature: 18471
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPA CCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCC ITRGGLKREISREPVPDVFAAKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVD CCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC NGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTYLPLDMKQTLSLGERN CCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCC >Mature Secondary Structure SLSPAKRKIALGVALAATLGATVWVGEQEDAAPELVAQAVPRPAAESAGRPAPPASGPA CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCC ITRGGLKREISREPVPDVFAAKSWYVPPPAPKYVPPPPPPPPPAPVPPPLPFVYLGKLVD CCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC NGEITVFVVFKGRNLAVKANEVIDSTYRIDSVDARSMALTYLPLDMKQTLSLGERN CCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA