Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317294

Identifier: 74317294

GI number: 74317294

Start: 1342279

End: 1343301

Strand: Direct

Name: 74317294

Synonym: Tbd_1276

Alternate gene names: NA

Gene position: 1342279-1343301 (Clockwise)

Preceding gene: 74317293

Following gene: 74317298

Centisome position: 46.13

GC content: 70.58

Gene sequence:

>1023_bases
ATGGCAGGACTTCACTCGGGAGAGGAAAACACCGGTTGCGAAGGCGTCGCAACCCCGGCTGCCGCGCCGCGCGCGGCCGT
GGTCGGTGCGGGGATTTCGGGCGCCAGTTGCGCCGGGGTGCTCGCCGCAGCGGGATGGGAGGTCGACGTGTTCGAGAAGG
CGCGCGGCGCCGGCGGACGCATGTCGAGCAGGCGCATCGAGCAGGGCTGGGCGACGCTCGGTACGCCATTTCTCTCGGCG
AAGCGCGAAGCCTTCCGCGGCAAGCTGCGCGACTGGGCACGCCAGGGCTGGATCGCGCCCGTGCGCGGCAGCCTCTGGCA
GGGCCGCGCGACGATCCATTGGGGCGAGGCGCAGTTGCAGAACCAGTATCGGCCGATGATCGAGCCTTCCCAGCTCGTCC
GCTCGCTGCTCGGCGGCGCACGCCTGCATACCAGTGCCGAGGTGAGCGCGGTGGCGCCGCGCACGATCGTGCTCGCGGAC
GGTCGCACGCTCGCGGACTACGACTGCGTGGTCTGCAGCATGCCGACGACGCAGGCGATTCCGCTGCTCGGCGCGCTGCC
CTTGCTGCAGGAGCGCCTCGGCGCAGTGCGCTATCGGCCGATCTGGACCTTCCTGATGCGCTGGGAAGGCGGGCCGGCGG
CCGACGTCATCAAGTTCGACGACCATTTGCTCAATCTGGCCGTGCGCCAGGTCTCGGGGGGCCCAGGCCTGTGGGTCGTC
TACAGCAGTCACGAGTTCGCCGAGACCTATCTCGAGGCCGGCTACGAGGAAGCGACGACGCGCGGCGCCTCGGCCTTGAT
GGGTCTCCTCGGCCTGCCATGGCCGGTCGAGGTCGAAGCCGCGCACCTCTGGCGCCACGCGCGGCCGGTCGGCGCGCTCG
GCGGGTTCTGGGCCGGCGATCGCGAAAACCGCGTCGCCGTGATCGGCGACGGCGTCACCGGTGTCGGCGTCGAGCGCGCT
TGGGAAAGCGGCGTGCGCCTCGCCCAGGCGATGCAGCAATCGAAGGAAGAATTGATGCCGTGA

Upstream 100 bases:

>100_bases
TCAGCCGGAATTTTTGCTGATAGAGTTCAGCTTCGCCGCGTCCGCGCGTGATTGCCTGGCGCGACGAGGATTTTTACCGG
AGAGGACAAGGATCAAGCAG

Downstream 100 bases:

>100_bases
CGCCTCAGGCGTCCGCGATCACGTAGCGGTTGCGGCCGCGGCGCTTGCCCTCGTACAGCGCGAGGTCGCCGCGTCGTCGA
CCGGCACCGGCGTCGTCGCG

Product: putative NAD/FAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSA
KREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLAD
GRTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV
YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERA
WESGVRLAQAMQQSKEELMP

Sequences:

>Translated_340_residues
MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSA
KREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLAD
GRTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV
YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERA
WESGVRLAQAMQQSKEELMP
>Mature_339_residues
AGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSAK
REAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADG
RTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVVY
SSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERAW
ESGVRLAQAMQQSKEELMP

Specific function: Unknown

COG id: COG3380

COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36441; Mature: 36310

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEHHHHHCCCCCC
MSSRRIEQGWATLGTPFLSAKREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQ
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHH
NQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADGRTLADYDCVVCSMPTTQAI
HCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCEEEEEECCCEECCCCEEEECCCCHHHH
PLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV
HHHHHHHHHHHHHCCEEHHHHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEE
YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGD
ECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RENRVAVIGDGVTGVGVERAWESGVRLAQAMQQSKEELMP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGR
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEHHHHHCCCCCC
MSSRRIEQGWATLGTPFLSAKREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQ
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHH
NQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADGRTLADYDCVVCSMPTTQAI
HCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCEEEEEECCCEECCCCEEEECCCCHHHH
PLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV
HHHHHHHHHHHHHCCEEHHHHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEE
YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGD
ECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RENRVAVIGDGVTGVGVERAWESGVRLAQAMQQSKEELMP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA