| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317294
Identifier: 74317294
GI number: 74317294
Start: 1342279
End: 1343301
Strand: Direct
Name: 74317294
Synonym: Tbd_1276
Alternate gene names: NA
Gene position: 1342279-1343301 (Clockwise)
Preceding gene: 74317293
Following gene: 74317298
Centisome position: 46.13
GC content: 70.58
Gene sequence:
>1023_bases ATGGCAGGACTTCACTCGGGAGAGGAAAACACCGGTTGCGAAGGCGTCGCAACCCCGGCTGCCGCGCCGCGCGCGGCCGT GGTCGGTGCGGGGATTTCGGGCGCCAGTTGCGCCGGGGTGCTCGCCGCAGCGGGATGGGAGGTCGACGTGTTCGAGAAGG CGCGCGGCGCCGGCGGACGCATGTCGAGCAGGCGCATCGAGCAGGGCTGGGCGACGCTCGGTACGCCATTTCTCTCGGCG AAGCGCGAAGCCTTCCGCGGCAAGCTGCGCGACTGGGCACGCCAGGGCTGGATCGCGCCCGTGCGCGGCAGCCTCTGGCA GGGCCGCGCGACGATCCATTGGGGCGAGGCGCAGTTGCAGAACCAGTATCGGCCGATGATCGAGCCTTCCCAGCTCGTCC GCTCGCTGCTCGGCGGCGCACGCCTGCATACCAGTGCCGAGGTGAGCGCGGTGGCGCCGCGCACGATCGTGCTCGCGGAC GGTCGCACGCTCGCGGACTACGACTGCGTGGTCTGCAGCATGCCGACGACGCAGGCGATTCCGCTGCTCGGCGCGCTGCC CTTGCTGCAGGAGCGCCTCGGCGCAGTGCGCTATCGGCCGATCTGGACCTTCCTGATGCGCTGGGAAGGCGGGCCGGCGG CCGACGTCATCAAGTTCGACGACCATTTGCTCAATCTGGCCGTGCGCCAGGTCTCGGGGGGCCCAGGCCTGTGGGTCGTC TACAGCAGTCACGAGTTCGCCGAGACCTATCTCGAGGCCGGCTACGAGGAAGCGACGACGCGCGGCGCCTCGGCCTTGAT GGGTCTCCTCGGCCTGCCATGGCCGGTCGAGGTCGAAGCCGCGCACCTCTGGCGCCACGCGCGGCCGGTCGGCGCGCTCG GCGGGTTCTGGGCCGGCGATCGCGAAAACCGCGTCGCCGTGATCGGCGACGGCGTCACCGGTGTCGGCGTCGAGCGCGCT TGGGAAAGCGGCGTGCGCCTCGCCCAGGCGATGCAGCAATCGAAGGAAGAATTGATGCCGTGA
Upstream 100 bases:
>100_bases TCAGCCGGAATTTTTGCTGATAGAGTTCAGCTTCGCCGCGTCCGCGCGTGATTGCCTGGCGCGACGAGGATTTTTACCGG AGAGGACAAGGATCAAGCAG
Downstream 100 bases:
>100_bases CGCCTCAGGCGTCCGCGATCACGTAGCGGTTGCGGCCGCGGCGCTTGCCCTCGTACAGCGCGAGGTCGCCGCGTCGTCGA CCGGCACCGGCGTCGTCGCG
Product: putative NAD/FAD-dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSA KREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLAD GRTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERA WESGVRLAQAMQQSKEELMP
Sequences:
>Translated_340_residues MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSA KREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLAD GRTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERA WESGVRLAQAMQQSKEELMP >Mature_339_residues AGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGRMSSRRIEQGWATLGTPFLSAK REAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQNQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADG RTLADYDCVVCSMPTTQAIPLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVVY SSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGDRENRVAVIGDGVTGVGVERAW ESGVRLAQAMQQSKEELMP
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36441; Mature: 36310
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGR CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEHHHHHCCCCCC MSSRRIEQGWATLGTPFLSAKREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQ CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHH NQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADGRTLADYDCVVCSMPTTQAI HCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCEEEEEECCCEECCCCEEEECCCCHHHH PLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV HHHHHHHHHHHHHCCEEHHHHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEE YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGD ECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RENRVAVIGDGVTGVGVERAWESGVRLAQAMQQSKEELMP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGLHSGEENTGCEGVATPAAAPRAAVVGAGISGASCAGVLAAAGWEVDVFEKARGAGGR CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEHHHHHCCCCCC MSSRRIEQGWATLGTPFLSAKREAFRGKLRDWARQGWIAPVRGSLWQGRATIHWGEAQLQ CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHH NQYRPMIEPSQLVRSLLGGARLHTSAEVSAVAPRTIVLADGRTLADYDCVVCSMPTTQAI HCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCEEEEEECCCEECCCCEEEECCCCHHHH PLLGALPLLQERLGAVRYRPIWTFLMRWEGGPAADVIKFDDHLLNLAVRQVSGGPGLWVV HHHHHHHHHHHHHCCEEHHHHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEE YSSHEFAETYLEAGYEEATTRGASALMGLLGLPWPVEVEAAHLWRHARPVGALGGFWAGD ECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RENRVAVIGDGVTGVGVERAWESGVRLAQAMQQSKEELMP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA