Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yxiO [H]

Identifier: 74317292

GI number: 74317292

Start: 1340390

End: 1341682

Strand: Direct

Name: yxiO [H]

Synonym: Tbd_1274

Alternate gene names: 74317292

Gene position: 1340390-1341682 (Clockwise)

Preceding gene: 74317291

Following gene: 74317293

Centisome position: 46.06

GC content: 70.38

Gene sequence:

>1293_bases
ATGGCGCCCCCGCTGCTGCAAGCGGGCGTGCGCCGGCACGAAGTCGCCGCGTGGGCGATGTACGACTTCGCGAACTCGGG
CTACACGACGGTCGTCATCACCGCGGTGTTCAGCGCCTATTTCGTCGGTGTCGTCGCCGCGGACGCGCCGTGGGCGACCT
TCGTCTGGACGCTAGCACTCTCGGCGTCCTACGCGCTGGTGATGCTGAGCGCGCCGCTCGTCGGCGCCTGGGCCGACGCC
CACGCGAGCAAGAAGAAGCTGCTCTGGCTGACGACCCTCGGCTGCGTCGGCTTCACGGCGCTGCTGTACTTCGCGGCGCC
GGGCGCGCTCGTGCTCGCAGTCGCCGCGCTCGTTATTTCGAATTACTTCTTCGGCACAGGCGAGAACCTGATCGCGGCCT
TCCTGCCCGAACTCGCGCGGCCGCGGGCGCTCGGCCGGGTGTCGGGCTGGGGCTGGGCGCTCGGCTATTTCGGCGGTCTC
GTCGCGCTCGGCGTCTGCCTCGCCTACATCGGCTGGGCGCGGGCGCGCGGGCAGGGCGCCACGGACTTCGTGCCCGTGAC
GATGCTGCTCACGGCGGGCCTGTTCGCGCTGGCGAGCCTGCCGACGCTGATCCTGCTGCGCGAGCGCGCGACAGCGCGCG
CCGAGCCGTCGCGAAAAAGCGCTTGGTCGCAGCTGCGCCACACGCTGTCGCACCTCGACCGGCTGCCCGATCTCAAGGCC
TTCCTCGTCTGTACCGTGCTCTACCAGGCGGGCATCCAGGCCGTCATCACACTGGCCGCGATCTACGCGAGCCAGGTGTT
CCACTTCGATACCGAACGGACGATCCGCCTCGTGTTCGTGGTCAACGTCACGGCCGCCCTCGGGGCGTTCCTCTTCGGCC
ACGTGCAGGACCGGATCGGCCACGTGCGGGCGATCGCACTGACCCTCGTAGGCTGGATCGTGATGGTCGCCCTCGCGTGG
GCGGCGCCCGACGAACGCATGTTCTGGGTCGCCGCCAATCTCGCCGGCCTGTGCATGGGCGCCTCGCAATCGGCCGGTCG
CGCGATGGTCGGTCTGCTCGCACCGCCGGCGCAGCAGGCCGAATTCTTCGGCCTCTGGGGGCTCGCCGTGAAGCTCGCCT
CGATACTCGGCCCGTTGACCTACGGCGTGGCGACCTGGCTTACGCACGGCGACCACCGCCAGGCCTTGCTCGTCACCGGC
AGCTATTTCGTTGCCGGCCTGTGGACGCTGCGACACGTGCGCGCCGCACGCGGGCGCCGCGCCGCACAGCGTTTCGCGCG
CGCAGCGGCATGA

Upstream 100 bases:

>100_bases
GCATCGTCGAACGCGGCCGCCATCCCGACCTACTCGTGAAAAACGGCGTCTACGCCCACATGTGGGCACTGCAGCAGCAG
GCCGAGGACGAGACCGCCTG

Downstream 100 bases:

>100_bases
GCGCGGCCATGCTCCTCGAAACCGACTGGGCGCGCGACGCACCGCGGCTCGCCGCGGTGCGTCGAGCCGTCTTCATCGAC
GAACAGGGCGTGCCGGAGCA

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MAPPLLQAGVRRHEVAAWAMYDFANSGYTTVVITAVFSAYFVGVVAADAPWATFVWTLALSASYALVMLSAPLVGAWADA
HASKKKLLWLTTLGCVGFTALLYFAAPGALVLAVAALVISNYFFGTGENLIAAFLPELARPRALGRVSGWGWALGYFGGL
VALGVCLAYIGWARARGQGATDFVPVTMLLTAGLFALASLPTLILLRERATARAEPSRKSAWSQLRHTLSHLDRLPDLKA
FLVCTVLYQAGIQAVITLAAIYASQVFHFDTERTIRLVFVVNVTAALGAFLFGHVQDRIGHVRAIALTLVGWIVMVALAW
AAPDERMFWVAANLAGLCMGASQSAGRAMVGLLAPPAQQAEFFGLWGLAVKLASILGPLTYGVATWLTHGDHRQALLVTG
SYFVAGLWTLRHVRAARGRRAAQRFARAAA

Sequences:

>Translated_430_residues
MAPPLLQAGVRRHEVAAWAMYDFANSGYTTVVITAVFSAYFVGVVAADAPWATFVWTLALSASYALVMLSAPLVGAWADA
HASKKKLLWLTTLGCVGFTALLYFAAPGALVLAVAALVISNYFFGTGENLIAAFLPELARPRALGRVSGWGWALGYFGGL
VALGVCLAYIGWARARGQGATDFVPVTMLLTAGLFALASLPTLILLRERATARAEPSRKSAWSQLRHTLSHLDRLPDLKA
FLVCTVLYQAGIQAVITLAAIYASQVFHFDTERTIRLVFVVNVTAALGAFLFGHVQDRIGHVRAIALTLVGWIVMVALAW
AAPDERMFWVAANLAGLCMGASQSAGRAMVGLLAPPAQQAEFFGLWGLAVKLASILGPLTYGVATWLTHGDHRQALLVTG
SYFVAGLWTLRHVRAARGRRAAQRFARAAA
>Mature_429_residues
APPLLQAGVRRHEVAAWAMYDFANSGYTTVVITAVFSAYFVGVVAADAPWATFVWTLALSASYALVMLSAPLVGAWADAH
ASKKKLLWLTTLGCVGFTALLYFAAPGALVLAVAALVISNYFFGTGENLIAAFLPELARPRALGRVSGWGWALGYFGGLV
ALGVCLAYIGWARARGQGATDFVPVTMLLTAGLFALASLPTLILLRERATARAEPSRKSAWSQLRHTLSHLDRLPDLKAF
LVCTVLYQAGIQAVITLAAIYASQVFHFDTERTIRLVFVVNVTAALGAFLFGHVQDRIGHVRAIALTLVGWIVMVALAWA
APDERMFWVAANLAGLCMGASQSAGRAMVGLLAPPAQQAEFFGLWGLAVKLASILGPLTYGVATWLTHGDHRQALLVTGS
YFVAGLWTLRHVRAARGRRAAQRFARAAA

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46013; Mature: 45882

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPLLQAGVRRHEVAAWAMYDFANSGYTTVVITAVFSAYFVGVVAADAPWATFVWTLAL
CCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SASYALVMLSAPLVGAWADAHASKKKLLWLTTLGCVGFTALLYFAAPGALVLAVAALVIS
HHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NYFFGTGENLIAAFLPELARPRALGRVSGWGWALGYFGGLVALGVCLAYIGWARARGQGA
HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDFVPVTMLLTAGLFALASLPTLILLRERATARAEPSRKSAWSQLRHTLSHLDRLPDLKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
FLVCTVLYQAGIQAVITLAAIYASQVFHFDTERTIRLVFVVNVTAALGAFLFGHVQDRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
HVRAIALTLVGWIVMVALAWAAPDERMFWVAANLAGLCMGASQSAGRAMVGLLAPPAQQA
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHCCCCHHHH
EFFGLWGLAVKLASILGPLTYGVATWLTHGDHRQALLVTGSYFVAGLWTLRHVRAARGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
AAQRFARAAA
HHHHHHHHCC
>Mature Secondary Structure 
APPLLQAGVRRHEVAAWAMYDFANSGYTTVVITAVFSAYFVGVVAADAPWATFVWTLAL
CCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SASYALVMLSAPLVGAWADAHASKKKLLWLTTLGCVGFTALLYFAAPGALVLAVAALVIS
HHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
NYFFGTGENLIAAFLPELARPRALGRVSGWGWALGYFGGLVALGVCLAYIGWARARGQGA
HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDFVPVTMLLTAGLFALASLPTLILLRERATARAEPSRKSAWSQLRHTLSHLDRLPDLKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
FLVCTVLYQAGIQAVITLAAIYASQVFHFDTERTIRLVFVVNVTAALGAFLFGHVQDRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
HVRAIALTLVGWIVMVALAWAAPDERMFWVAANLAGLCMGASQSAGRAMVGLLAPPAQQA
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHCCCCHHHH
EFFGLWGLAVKLASILGPLTYGVATWLTHGDHRQALLVTGSYFVAGLWTLRHVRAARGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
AAQRFARAAA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]