| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ylxH [H]
Identifier: 74317266
GI number: 74317266
Start: 1311064
End: 1311867
Strand: Direct
Name: ylxH [H]
Synonym: Tbd_1248
Alternate gene names: 74317266
Gene position: 1311064-1311867 (Clockwise)
Preceding gene: 74317265
Following gene: 74317267
Centisome position: 45.06
GC content: 68.41
Gene sequence:
>804_bases ATGTCGGGCCAGAAGAACGCCGGCAAGACCGCGGCGACCGCCAATCTCGCCGTCGCCCTTGCGCGCTCGGGGCGCGACGT GCTCATCGTCGACCAGGACCGCCACGGCCGCGGCGCCGCCGCGGCGTTCGGCCTGACCCCGCGCTACGACGTCGCGGACG CGTTGGCAGGGCGGTGTGACCTGGATGCGCTGATCCTCACCGGCCCCGACAACGTGCAGGTACTGCCACTCGGCGGCGGT TTCAAGCAGCTCGGTTCGCTGTCGGAACGCGATCAGGACTGGCTCGCACAGAATTTCAACCGGTTGCAGTGCGGGGTCGA CGTCGTGCTCGTCGACATGGAGGAGGCGACCGATCCGGACGCCTTGCCGCTCGGCCTCGCAGCGTCGGAAATCATGGTCG TGCTGCCGCCGGGCAACAGCGCGATCACCGAGGCGTACACGCTGGTCAAGCGTCTCGCGCAGAACTTCGGCAAGTGCCAG TTCCGCCTGCTGCTCAACCGCATGTCGTCCGCGGCGCAGGCCGAGGCCGTGGCGCGCAATTTCTCGCGTACCGCCGAGCA GTATCTTGGCGTCTCGGTCGACTATCTTGGTTACATACCGCTCGACGAGCGGCTCGACCGCGCGAACCGGCTGCGCACGT CGGTCGTCGACGCGTTTCCGGTCGCCCAATCGACCTCGCACTTCCGCACTCTCGCTGACGGCCTGCTGCGCTGGCCGCAA CCCGCGAGCCTCGGCGGACTGGGCGGGTTCATGCAACGCGTGATCCAGGGCGGACGCCTCGCAGAAGCCTGCAGGAGAGG GTGA
Upstream 100 bases:
>100_bases TACCGTGAAAGCGCGGTGACCCTTGGATAAGTTCGTCAGCGATCAGGCCGCCGGCCTGCGGCGGCTCCTCGGGCAGACCG GGTTCCAGGTCATCACCGTG
Downstream 100 bases:
>100_bases AGATGTACACCGCAAGCGGCAAGACCGCGAAGAGCGAAAAAAACGATCTGCTCGAGCAGTACATGCCGATGGTCAAGCGG CTCGCGCACCACATGATGGG
Product: putative flagellar biosynthesis protein FlhG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSGQKNAGKTAATANLAVALARSGRDVLIVDQDRHGRGAAAAFGLTPRYDVADALAGRCDLDALILTGPDNVQVLPLGGG FKQLGSLSERDQDWLAQNFNRLQCGVDVVLVDMEEATDPDALPLGLAASEIMVVLPPGNSAITEAYTLVKRLAQNFGKCQ FRLLLNRMSSAAQAEAVARNFSRTAEQYLGVSVDYLGYIPLDERLDRANRLRTSVVDAFPVAQSTSHFRTLADGLLRWPQ PASLGGLGGFMQRVIQGGRLAEACRRG
Sequences:
>Translated_267_residues MSGQKNAGKTAATANLAVALARSGRDVLIVDQDRHGRGAAAAFGLTPRYDVADALAGRCDLDALILTGPDNVQVLPLGGG FKQLGSLSERDQDWLAQNFNRLQCGVDVVLVDMEEATDPDALPLGLAASEIMVVLPPGNSAITEAYTLVKRLAQNFGKCQ FRLLLNRMSSAAQAEAVARNFSRTAEQYLGVSVDYLGYIPLDERLDRANRLRTSVVDAFPVAQSTSHFRTLADGLLRWPQ PASLGGLGGFMQRVIQGGRLAEACRRG >Mature_266_residues SGQKNAGKTAATANLAVALARSGRDVLIVDQDRHGRGAAAAFGLTPRYDVADALAGRCDLDALILTGPDNVQVLPLGGGF KQLGSLSERDQDWLAQNFNRLQCGVDVVLVDMEEATDPDALPLGLAASEIMVVLPPGNSAITEAYTLVKRLAQNFGKCQF RLLLNRMSSAAQAEAVARNFSRTAEQYLGVSVDYLGYIPLDERLDRANRLRTSVVDAFPVAQSTSHFRTLADGLLRWPQP ASLGGLGGFMQRVIQGGRLAEACRRG
Specific function: Unknown
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28583; Mature: 28452
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQKNAGKTAATANLAVALARSGRDVLIVDQDRHGRGAAAAFGLTPRYDVADALAGRCD CCCCCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHCCCCC LDALILTGPDNVQVLPLGGGFKQLGSLSERDQDWLAQNFNRLQCGVDVVLVDMEEATDPD CCEEEEECCCCEEEEECCCCHHHHCCCCCCHHHHHHHCHHHHCCCEEEEEEECHHCCCCC ALPLGLAASEIMVVLPPGNSAITEAYTLVKRLAQNFGKCQFRLLLNRMSSAAQAEAVARN CCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FSRTAEQYLGVSVDYLGYIPLDERLDRANRLRTSVVDAFPVAQSTSHFRTLADGLLRWPQ HHHHHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC PASLGGLGGFMQRVIQGGRLAEACRRG CCCCCHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure SGQKNAGKTAATANLAVALARSGRDVLIVDQDRHGRGAAAAFGLTPRYDVADALAGRCD CCCCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHCCCCC LDALILTGPDNVQVLPLGGGFKQLGSLSERDQDWLAQNFNRLQCGVDVVLVDMEEATDPD CCEEEEECCCCEEEEECCCCHHHHCCCCCCHHHHHHHCHHHHCCCEEEEEEECHHCCCCC ALPLGLAASEIMVVLPPGNSAITEAYTLVKRLAQNFGKCQFRLLLNRMSSAAQAEAVARN CCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FSRTAEQYLGVSVDYLGYIPLDERLDRANRLRTSVVDAFPVAQSTSHFRTLADGLLRWPQ HHHHHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC PASLGGLGGFMQRVIQGGRLAEACRRG CCCCCHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]