| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yeaE [H]
Identifier: 74317218
GI number: 74317218
Start: 1260527
End: 1261444
Strand: Direct
Name: yeaE [H]
Synonym: Tbd_1200
Alternate gene names: 74317218
Gene position: 1260527-1261444 (Clockwise)
Preceding gene: 74317217
Following gene: 74317219
Centisome position: 43.32
GC content: 70.04
Gene sequence:
>918_bases GTGCAAACACCTGACGCCAAACGACGCAGCGTGCTCGCGGCGCTTGCCATGCTGCCGCTCGCCTGCACCCTGCGCGCCGC CCCCGCTCGCGCGCTCGCGACGCGGAACGTGCCGTCGACCGGCGAGGTCCTGCCGCGCGTCGGCCTCGGCACCTGGATCA CCTTCAACGTCGGCGACGACCCCGCGGCGCGCGACGCCCGCGCCGAGGTGCTGCGCAATTTCTTCGCCGCCGGCGGGCGG CTCGTCGACAGCTCGCCGATGTACGGCTCGTCGCAGGAGGTCATCGGTCACGCCTTGCGCTCGATCGGGCGGCTCCGCAC GCTCTTCGCAGCCGACAAGGTGTGGTCGGCCGACGGCGACGACGGGCCGGAACAGATCGAACGCTCGCGTCGCCGCTGGG CGGTGCCGCGTTTCGACCTGCTGCAGGTCCACAACCTTCTCGCGTGGCAGGACCATCTGCCGACCCTGTTCGCGATGAAG GCCGCGGGGCAGCTGCGTTACGTCGGCATCACGACCTCGCACGGCCGGCGGCATCGCGAAATGGAAAAAATCATGACGAC GCAGCCGATCGATTTCGTCCAGTTCACTTACAACCCGGTCGACCGCGAGGCCGAGGCGCGGCTCCTGCCGCTCGCGCAGG CGCGCGGAATCGCGGTCATCGCCAACCGCCCGTTCCAGCAGGGCCAACTGCTCGAACGGCTGGCGGGCAGGCGATTGCCG TCGTGGGCCGGCGAAATCGACTGCACGAGTTGGGCGCAGTTCGTGCTCAAGTTCATCATTTCGCACCCGGCCGTGACCTG CGCGATCCCGGCGACGACGCGCGTCGACCACGTGCTCGAAAACCTCGACGCGGCGGCGGGTCGATTGCCCGACCAGGCCT TGCGTGCACGCATGGCCGCAGCCGTGGCCGGGCGCTGA
Upstream 100 bases:
>100_bases CCCGCCCCGGAGGCTTCGCGCCGAAACGAGGGTTCCACGCCGCCCGCGCGGTGCCGCCTCGACTATCCTGAAACCTACAC GCACTGTCTTCGGGGACTCC
Downstream 100 bases:
>100_bases TGTCGGAGTGGTGGACCTACGGGCTGCGCGACCTGCTGCTGTTTTCGCCGCAGGCCTATTACCGGCTGTTCGAGCTGCAC AATCTCGCTTGGTGGCCGCT
Product: putative oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MQTPDAKRRSVLAALAMLPLACTLRAAPARALATRNVPSTGEVLPRVGLGTWITFNVGDDPAARDARAEVLRNFFAAGGR LVDSSPMYGSSQEVIGHALRSIGRLRTLFAADKVWSADGDDGPEQIERSRRRWAVPRFDLLQVHNLLAWQDHLPTLFAMK AAGQLRYVGITTSHGRRHREMEKIMTTQPIDFVQFTYNPVDREAEARLLPLAQARGIAVIANRPFQQGQLLERLAGRRLP SWAGEIDCTSWAQFVLKFIISHPAVTCAIPATTRVDHVLENLDAAAGRLPDQALRARMAAAVAGR
Sequences:
>Translated_305_residues MQTPDAKRRSVLAALAMLPLACTLRAAPARALATRNVPSTGEVLPRVGLGTWITFNVGDDPAARDARAEVLRNFFAAGGR LVDSSPMYGSSQEVIGHALRSIGRLRTLFAADKVWSADGDDGPEQIERSRRRWAVPRFDLLQVHNLLAWQDHLPTLFAMK AAGQLRYVGITTSHGRRHREMEKIMTTQPIDFVQFTYNPVDREAEARLLPLAQARGIAVIANRPFQQGQLLERLAGRRLP SWAGEIDCTSWAQFVLKFIISHPAVTCAIPATTRVDHVLENLDAAAGRLPDQALRARMAAAVAGR >Mature_305_residues MQTPDAKRRSVLAALAMLPLACTLRAAPARALATRNVPSTGEVLPRVGLGTWITFNVGDDPAARDARAEVLRNFFAAGGR LVDSSPMYGSSQEVIGHALRSIGRLRTLFAADKVWSADGDDGPEQIERSRRRWAVPRFDLLQVHNLLAWQDHLPTLFAMK AAGQLRYVGITTSHGRRHREMEKIMTTQPIDFVQFTYNPVDREAEARLLPLAQARGIAVIANRPFQQGQLLERLAGRRLP SWAGEIDCTSWAQFVLKFIISHPAVTCAIPATTRVDHVLENLDAAAGRLPDQALRARMAAAVAGR
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788081, Length=258, Percent_Identity=28.2945736434109, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87081735, Length=260, Percent_Identity=26.5384615384615, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 33566; Mature: 33566
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPDAKRRSVLAALAMLPLACTLRAAPARALATRNVPSTGEVLPRVGLGTWITFNVGDD CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCC PAARDARAEVLRNFFAAGGRLVDSSPMYGSSQEVIGHALRSIGRLRTLFAADKVWSADGD CCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DGPEQIERSRRRWAVPRFDLLQVHNLLAWQDHLPTLFAMKAAGQLRYVGITTSHGRRHRE CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHHH MEKIMTTQPIDFVQFTYNPVDREAEARLLPLAQARGIAVIANRPFQQGQLLERLAGRRLP HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCC SWAGEIDCTSWAQFVLKFIISHPAVTCAIPATTRVDHVLENLDAAAGRLPDQALRARMAA CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVAGR HHCCC >Mature Secondary Structure MQTPDAKRRSVLAALAMLPLACTLRAAPARALATRNVPSTGEVLPRVGLGTWITFNVGDD CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCC PAARDARAEVLRNFFAAGGRLVDSSPMYGSSQEVIGHALRSIGRLRTLFAADKVWSADGD CCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DGPEQIERSRRRWAVPRFDLLQVHNLLAWQDHLPTLFAMKAAGQLRYVGITTSHGRRHRE CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHHH MEKIMTTQPIDFVQFTYNPVDREAEARLLPLAQARGIAVIANRPFQQGQLLERLAGRRLP HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCC SWAGEIDCTSWAQFVLKFIISHPAVTCAIPATTRVDHVLENLDAAAGRLPDQALRARMAA CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVAGR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]