| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is glgC [H]
Identifier: 74317193
GI number: 74317193
Start: 1234390
End: 1235616
Strand: Direct
Name: glgC [H]
Synonym: Tbd_1175
Alternate gene names: 74317193
Gene position: 1234390-1235616 (Clockwise)
Preceding gene: 74317192
Following gene: 74317194
Centisome position: 42.42
GC content: 64.96
Gene sequence:
>1227_bases ATGGCAGGAGGTGAGGGCTCGCGTCTGCAGCCCTTGACGGCGGATCGCTGCAAGCCAGCCGTTCCCTTCGGCAGCCGCTA CCGCATCGTCGATTTCGTACTGAGCAACCTGACCAATTCCGACATCCGCTCGATCTACGTGCTCGTGCAGTATCGGCCGC AGTCGCTGATCGAACACGTGCGCAAGGCGTGGACCGTCACCTCGCTGTTTGCCGATCAGTTCCTGACCGTGGTGCCGCCG CAGATGACCAAGACGTCGACCGTTTTCGGGGGAACCGCGGACGCGGTCTACCAGAGCCTCGACCTGATGAACATGCACCG TCCCGACCTCGTCGCGATATTCGGCGCCGACCACATCTATCGCATGGACGTGCGGCAGATGGTGCGCTTCCATTGCGAGC ACGATGCCGAGGCGACGGTCGCGGCCTTGCCGGTTTCTCTAAACCAGGCGTCGAGTTTCGGCATCATCGAGACCGACGCG CAAAACCGGATCATCGGCTTCGACGAGAAACCCAAGGCGGCAAAACCGATGCCGGACGATCCCGACCATGCCTACGCGTC GATGGGGAATTATCTTTTCAACGCCGACGTGCTGCGCGAGGCGCTGGAGGAGGCGCACCGGCGCGGGGAGACCGATTTCG GCCGGCATGTCCTGCCGCGCCTCGCACAGAGCCACGGCGTCTACGCCTACAACTTCGCGACCAACGAAGTGCCGGGAACG AAGCGCTACGAGGAACAGGCCTACTGGCGCGACGTCGGCACGCTCGACACCTACTTCGACGCCCACCTCGACGTGCTCGG ACTCGAACCGCGCTTCGACGCGTTCAACCCGCAGTGGCCGATCTATTCGAGCCACTATCAGGGTCCGACGGCACGTGTGT TGCGCGCGGAACTCGACAACGTCCTGCTCGGTGCGGCGACGATCGTGACCGGCGCAAAAATCCGCAACTCGATCCTTCGC CGGGAGGTCGTCGTCGAGCCCGGCGCCGAAATCGAGGACAGCGTGATCATGGATTACGTCTGTATCGGCGCCGGCGCGAA GCTGCGCCGCGTGATCATCGACCGCCACAACGTCGTTCCGCCCGGCGCGCGGATCGGCTACGACCACGATGCCGACCGCG CGGCCGGCTACCACGTCACCGAAGGCGGGGTCGTCGTCGCGCCGCTCGGCGACGTGCGCTTCTACGCGCGCGAGGCCTCG CGCCACAGCGGCGGCTATTCGGAGTAG
Upstream 100 bases:
>100_bases CACGTCTACTATAAATAGGACCGGACACACCGGTAAGCAAAGGCGATGAATGATGACACTTGAAAGACGCCGACGAGAAA AAAAGGTGGTGGCGTTTGTG
Downstream 100 bases:
>100_bases CGCCTTAGGAGCCGGACCCGGCGGGCAGCCGTGCTAGACTCGCGCAAAACCCGAGACCCGCATGGCTGAGGAGAACGACC TGTCCCGCACCGAACCGGCG
Product: glucose-1-phosphate adenylyltransferase
Products: NA
Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAGGEGSRLQPLTADRCKPAVPFGSRYRIVDFVLSNLTNSDIRSIYVLVQYRPQSLIEHVRKAWTVTSLFADQFLTVVPP QMTKTSTVFGGTADAVYQSLDLMNMHRPDLVAIFGADHIYRMDVRQMVRFHCEHDAEATVAALPVSLNQASSFGIIETDA QNRIIGFDEKPKAAKPMPDDPDHAYASMGNYLFNADVLREALEEAHRRGETDFGRHVLPRLAQSHGVYAYNFATNEVPGT KRYEEQAYWRDVGTLDTYFDAHLDVLGLEPRFDAFNPQWPIYSSHYQGPTARVLRAELDNVLLGAATIVTGAKIRNSILR REVVVEPGAEIEDSVIMDYVCIGAGAKLRRVIIDRHNVVPPGARIGYDHDADRAAGYHVTEGGVVVAPLGDVRFYAREAS RHSGGYSE
Sequences:
>Translated_408_residues MAGGEGSRLQPLTADRCKPAVPFGSRYRIVDFVLSNLTNSDIRSIYVLVQYRPQSLIEHVRKAWTVTSLFADQFLTVVPP QMTKTSTVFGGTADAVYQSLDLMNMHRPDLVAIFGADHIYRMDVRQMVRFHCEHDAEATVAALPVSLNQASSFGIIETDA QNRIIGFDEKPKAAKPMPDDPDHAYASMGNYLFNADVLREALEEAHRRGETDFGRHVLPRLAQSHGVYAYNFATNEVPGT KRYEEQAYWRDVGTLDTYFDAHLDVLGLEPRFDAFNPQWPIYSSHYQGPTARVLRAELDNVLLGAATIVTGAKIRNSILR REVVVEPGAEIEDSVIMDYVCIGAGAKLRRVIIDRHNVVPPGARIGYDHDADRAAGYHVTEGGVVVAPLGDVRFYAREAS RHSGGYSE >Mature_407_residues AGGEGSRLQPLTADRCKPAVPFGSRYRIVDFVLSNLTNSDIRSIYVLVQYRPQSLIEHVRKAWTVTSLFADQFLTVVPPQ MTKTSTVFGGTADAVYQSLDLMNMHRPDLVAIFGADHIYRMDVRQMVRFHCEHDAEATVAALPVSLNQASSFGIIETDAQ NRIIGFDEKPKAAKPMPDDPDHAYASMGNYLFNADVLREALEEAHRRGETDFGRHVLPRLAQSHGVYAYNFATNEVPGTK RYEEQAYWRDVGTLDTYFDAHLDVLGLEPRFDAFNPQWPIYSSHYQGPTARVLRAELDNVLLGAATIVTGAKIRNSILRR EVVVEPGAEIEDSVIMDYVCIGAGAKLRRVIIDRHNVVPPGARIGYDHDADRAAGYHVTEGGVVVAPLGDVRFYAREASR HSGGYSE
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG0448
COG function: function code G; ADP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789837, Length=396, Percent_Identity=36.6161616161616, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005836 - InterPro: IPR023049 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.27 [H]
Molecular weight: Translated: 45397; Mature: 45265
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGEGSRLQPLTADRCKPAVPFGSRYRIVDFVLSNLTNSDIRSIYVLVQYRPQSLIEHV CCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHH RKAWTVTSLFADQFLTVVPPQMTKTSTVFGGTADAVYQSLDLMNMHRPDLVAIFGADHIY HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE RMDVRQMVRFHCEHDAEATVAALPVSLNQASSFGIIETDAQNRIIGFDEKPKAAKPMPDD HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCC PDHAYASMGNYLFNADVLREALEEAHRRGETDFGRHVLPRLAQSHGVYAYNFATNEVPGT CCHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCC KRYEEQAYWRDVGTLDTYFDAHLDVLGLEPRFDAFNPQWPIYSSHYQGPTARVLRAELDN CHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VLLGAATIVTGAKIRNSILRREVVVEPGAEIEDSVIMDYVCIGAGAKLRRVIIDRHNVVP HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHEECCCHHHHHHHHHCCCCCC PGARIGYDHDADRAAGYHVTEGGVVVAPLGDVRFYAREASRHSGGYSE CCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGGEGSRLQPLTADRCKPAVPFGSRYRIVDFVLSNLTNSDIRSIYVLVQYRPQSLIEHV CCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHH RKAWTVTSLFADQFLTVVPPQMTKTSTVFGGTADAVYQSLDLMNMHRPDLVAIFGADHIY HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE RMDVRQMVRFHCEHDAEATVAALPVSLNQASSFGIIETDAQNRIIGFDEKPKAAKPMPDD HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCC PDHAYASMGNYLFNADVLREALEEAHRRGETDFGRHVLPRLAQSHGVYAYNFATNEVPGT CCHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCC KRYEEQAYWRDVGTLDTYFDAHLDVLGLEPRFDAFNPQWPIYSSHYQGPTARVLRAELDN CHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VLLGAATIVTGAKIRNSILRREVVVEPGAEIEDSVIMDYVCIGAGAKLRRVIIDRHNVVP HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHEECCCHHHHHHHHHCCCCCC PGARIGYDHDADRAAGYHVTEGGVVVAPLGDVRFYAREASRHSGGYSE CCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA