| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nuoH
Identifier: 74317167
GI number: 74317167
Start: 1203946
End: 1204977
Strand: Direct
Name: nuoH
Synonym: Tbd_1149
Alternate gene names: 74317167
Gene position: 1203946-1204977 (Clockwise)
Preceding gene: 74317166
Following gene: 74317168
Centisome position: 41.38
GC content: 63.08
Gene sequence:
>1032_bases ATGGAGGCGGGTATCGTGGAGGCCGCGGGAATGGATTGGGAGGCGTTCCAGACCGTCGCATGGACGCTGGTCAAGATCAT GGCGCTGGTCGTGCCGCTGATGCTCGGCGTCGCGTATCTGACCTATGCCGAGCGCAAGATCATCGGCTGGATGCAGGTCC GGATTGGCCCCAACCGCGTCGGTTTCCAGGGTCTTCTGCAGCCGATCGCCGACGCCGTGAAGCTGCTGATGAAGGAAATC ATCATTCCTTCCGGCGCCAGCCGCGCGCTTTTCATCCTCGGCCCGATCCTCGCTATCGCGCCGGCGCTCGCGGCTTGGGC GGTCATCCCGTTCAGCGACGGGCTCGTTCTCGCCGACATCAACGCGGGACTGCTCTACGTGATGGCGATCACGTCGATGG GCGTCTATGGCGTGATCATCGCGGGCTGGGCATCCAACTCGAAGTACGCATTCCTCGGCGCGATGCGCTCGGCGGCGCAG ATCGTGTCCTACGAGATCGCGATGGGCTTCGCGCTCGTCGGCGTATTGATGGCCTCGCAGTCGCTCAATCTGAGCGCGAT CGTGCAGGGCCAGGCCGGCGGCATCCAGCAGTGGTATCTGTGGCCATTGTTCCCGCTTTTCGTCGTCTATCTCGTCGCCG GCGTCGCCGAGACCAACCGCGCGCCGTTCGACGTCGCGGAGGGCGAGTCCGAAATCGTCGCCGGCTTCCACGTCGAATAC TCGGGCATGGCTTTCGCCGTGTTCTTCCTTGCGGAATACGCCAACATGATCCTGGTCGCCGCGCTGACGACGCTCATGTT CCTCGGCGGCTGGCTGTCGCCGGTCGCCTTCCTGCCGGACGGCATCGTCTGGTGGTTGCTGAAGACCGGCTTCGTGTTGT TCCTCTTCCTGTGGTTCCGCGCGACCTTCCCGCGTTATCGCTACGACCAGATCATGCGTCTCGGCTGGAAGGTCTTCATC CCGATCACCATTGTCTGGATCGTCTTCGTCGGCGGCATGATGCAGACGCCCTACGGTCACCTTTTCCATTGA
Upstream 100 bases:
>100_bases ACGACCTGCTGCCTGACAACTGCGTGCGTATTCCGAGCGGCCATCCGTTGACGGCCGGGCTCGGCCCGATGTTTGGGCCG ATCACCGCGGAGCCGGTCTG
Downstream 100 bases:
>100_bases GCGCCCGATGAGACGGATCACCCATTTCTTCGGCAGCCTGTTCCTCGTCGAGCTTCTGCGCGGCATGATGCTGACCGGGC GCCATCTGTTCGCGCGCAAG
Product: NADH dehydrogenase I subunit H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MEAGIVEAAGMDWEAFQTVAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRVGFQGLLQPIADAVKLLMKEI IIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADINAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQ IVSYEIAMGFALVGVLMASQSLNLSAIVQGQAGGIQQWYLWPLFPLFVVYLVAGVAETNRAPFDVAEGESEIVAGFHVEY SGMAFAVFFLAEYANMILVAALTTLMFLGGWLSPVAFLPDGIVWWLLKTGFVLFLFLWFRATFPRYRYDQIMRLGWKVFI PITIVWIVFVGGMMQTPYGHLFH
Sequences:
>Translated_343_residues MEAGIVEAAGMDWEAFQTVAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRVGFQGLLQPIADAVKLLMKEI IIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADINAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQ IVSYEIAMGFALVGVLMASQSLNLSAIVQGQAGGIQQWYLWPLFPLFVVYLVAGVAETNRAPFDVAEGESEIVAGFHVEY SGMAFAVFFLAEYANMILVAALTTLMFLGGWLSPVAFLPDGIVWWLLKTGFVLFLFLWFRATFPRYRYDQIMRLGWKVFI PITIVWIVFVGGMMQTPYGHLFH >Mature_343_residues MEAGIVEAAGMDWEAFQTVAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRVGFQGLLQPIADAVKLLMKEI IIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADINAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQ IVSYEIAMGFALVGVLMASQSLNLSAIVQGQAGGIQQWYLWPLFPLFVVYLVAGVAETNRAPFDVAEGESEIVAGFHVEY SGMAFAVFFLAEYANMILVAALTTLMFLGGWLSPVAFLPDGIVWWLLKTGFVLFLFLWFRATFPRYRYDQIMRLGWKVFI PITIVWIVFVGGMMQTPYGHLFH
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=292, Percent_Identity=44.5205479452055, Blast_Score=246, Evalue=2e-65, Organism=Escherichia coli, GI1788618, Length=304, Percent_Identity=41.7763157894737, Blast_Score=263, Evalue=9e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_THIDA (Q3SJQ0)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314907.1 - STRING: Q3SJQ0 - GeneID: 3673221 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1149 - NMPDR: fig|292415.3.peg.1149 - eggNOG: COG1005 - HOGENOM: HBG727670 - OMA: SSHKAMF - PhylomeDB: Q3SJQ0 - BioCyc: TDEN292415:TBD_1149-MONOMER - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 37614; Mature: 37614
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd1b55f0)-; HASH(0x1aceafa8)-; HASH(0x1bd52f4c)-; HASH(0x1b64d1c8)-; HASH(0x1bb44470)-; HASH(0x1bfbf0c8)-; HASH(0x1ba5cc10)-; HASH(0x1bf96ed4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAGIVEAAGMDWEAFQTVAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRV CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC GFQGLLQPIADAVKLLMKEIIIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC NAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQIVSYEIAMGFALVGVLMASQ CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLNLSAIVQGQAGGIQQWYLWPLFPLFVVYLVAGVAETNRAPFDVAEGESEIVAGFHVEY CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEE SGMAFAVFFLAEYANMILVAALTTLMFLGGWLSPVAFLPDGIVWWLLKTGFVLFLFLWFR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATFPRYRYDQIMRLGWKVFIPITIVWIVFVGGMMQTPYGHLFH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCH >Mature Secondary Structure MEAGIVEAAGMDWEAFQTVAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRV CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC GFQGLLQPIADAVKLLMKEIIIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC NAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQIVSYEIAMGFALVGVLMASQ CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLNLSAIVQGQAGGIQQWYLWPLFPLFVVYLVAGVAETNRAPFDVAEGESEIVAGFHVEY CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEE SGMAFAVFFLAEYANMILVAALTTLMFLGGWLSPVAFLPDGIVWWLLKTGFVLFLFLWFR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATFPRYRYDQIMRLGWKVFIPITIVWIVFVGGMMQTPYGHLFH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA