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The map label for this gene is yhbY [C]

Identifier: 74317149

GI number: 74317149

Start: 1186529

End: 1186825

Strand: Reverse

Name: yhbY [C]

Synonym: Tbd_1131

Alternate gene names: 74317149

Gene position: 1186825-1186529 (Counterclockwise)

Preceding gene: 74317176

Following gene: 74317141

Centisome position: 40.79

GC content: 65.99

Gene sequence:

>297_bases
ATGAAACCACTCACCCCCGCGCAGCGCCAATACCTGCGAGGCCTCGCTCACAACCGCCAGCCCGTCGTCATGATCCGTGG
CCAGGGGCTGACGCCGGCGGTGCTGAAAGAGATCGAGCGCGCCCTCGCGGCGCATGAACTGATCAAGATCAAGGCGGCCA
GCGACGAGTCCGAGGTGCGCCGGGCCTGGCTGACGGAAATTTGCGCCGCGAGCGGCGCCGAACCGGTCCAGCAAATCGGC
AAGGTATTGGTGATTTATCGCCCGGCGGCGAAGCCTGAGATCACGCTCCCCGCCTGA

Upstream 100 bases:

>100_bases
CTCGTGCATCCACGCGCTGCCCGATTTCGTCCGCTTGGGTTTCTGCGCCATTTCTTCAGGTCGTATCGGCTACAATCCGC
GCTCGATTTAAGGAATACCC

Downstream 100 bases:

>100_bases
AGCCGCGCTCAGCGGGCGAGGCCCGCGCGCCACACGAGCAGGAGGCCCAATCCGCTCTGCAGCAGGTAGAGAATGCTCGA
TACGCCGTGCCAATGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKPLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRAWLTEICAASGAEPVQQIG
KVLVIYRPAAKPEITLPA

Sequences:

>Translated_98_residues
MKPLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRAWLTEICAASGAEPVQQIG
KVLVIYRPAAKPEITLPA
>Mature_98_residues
MKPLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRAWLTEICAASGAEPVQQIG
KVLVIYRPAAKPEITLPA

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=94, Percent_Identity=47.8723404255319, Blast_Score=89, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10745; Mature: 10745

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVR
CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHH
RAWLTEICAASGAEPVQQIGKVLVIYRPAAKPEITLPA
HHHHHHHHHCCCCHHHHHHCCEEEEECCCCCCCEECCC
>Mature Secondary Structure
MKPLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVR
CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHH
RAWLTEICAASGAEPVQQIGKVLVIYRPAAKPEITLPA
HHHHHHHHHCCCCHHHHHHCCEEEEECCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]