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The map label for this gene is yadS [H]

Identifier: 74317133

GI number: 74317133

Start: 1172088

End: 1172702

Strand: Direct

Name: yadS [H]

Synonym: Tbd_1115

Alternate gene names: 74317133

Gene position: 1172088-1172702 (Clockwise)

Preceding gene: 74317131

Following gene: 74317135

Centisome position: 40.28

GC content: 69.92

Gene sequence:

>615_bases
ATGGAAAACCTGCTGTACTGGGCCGGCCTGTCGGCCGTTGCGGTCAATGCGCTGACCGGCGTGCTCGACGCGGGCCGCAA
GCGGATGGACCTGATCGGTGTGGTCATGGTGGGCGCAGCCACCGCGCTCGGCGGCGGCACCGTGCGCGACGTGCTGCTCG
CGCGCCCCGTGTTCTGGATCGCCGACCAGGTCTATCTGATCGTCGCGCTCGCGGCCACGCTGGCCGTCTTCTTCGTCGTG
CGCAACCTGCGGCTGCCGCCGCGGCTGTTTCTGATTCCCGATGCGTTCGGCCTCGCGCTCTTCACTATCGTCGGCACCCA
GATCGCGCTCGAGTGGCAGGCGCCGTGGCTGGTCGCGAGCCTGCTGGGCATGATCACGGGCGTCGTCGGCGGCGTGTTGC
GCGACGTGCTGTGCAACGAGGTGCCGCTGGTTTTCGTGCGCGGCGAACTGTATGCCTCCGCGGCGTGGCTCGGCGCGCTG
GTCCTGGTCGGGCTGCAGGCCTTGTCGGTGTCGCCGGTCGCCGCGGCGTGGGCGGGGATGGCGACCGTTCTCGTCGTCCG
GCTGGCGGCGATGGCCTTCCGCATCACCCTGCCGACGTATTCGGAGCGAGAGTAG

Upstream 100 bases:

>100_bases
GTATCGCGCGGCCGCGGCCGTCCCGCGCGGCTACGGGCGACTTGCGCTACGCTAGCGCGTCACGACCTTGCGAGCGGCCG
GCGCCGCCCCGACCGATCTT

Downstream 100 bases:

>100_bases
GCGCGACCTCGTCGCCAGCCGGCGGTTCGCCGGCGCCGCCGAGATGGCCGGCGAGAAAGTCGATGAAAGCGTGCGCGCGG
GCGGAAAGATGGCGCGTCGG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MENLLYWAGLSAVAVNALTGVLDAGRKRMDLIGVVMVGAATALGGGTVRDVLLARPVFWIADQVYLIVALAATLAVFFVV
RNLRLPPRLFLIPDAFGLALFTIVGTQIALEWQAPWLVASLLGMITGVVGGVLRDVLCNEVPLVFVRGELYASAAWLGAL
VLVGLQALSVSPVAAAWAGMATVLVVRLAAMAFRITLPTYSERE

Sequences:

>Translated_204_residues
MENLLYWAGLSAVAVNALTGVLDAGRKRMDLIGVVMVGAATALGGGTVRDVLLARPVFWIADQVYLIVALAATLAVFFVV
RNLRLPPRLFLIPDAFGLALFTIVGTQIALEWQAPWLVASLLGMITGVVGGVLRDVLCNEVPLVFVRGELYASAAWLGAL
VLVGLQALSVSPVAAAWAGMATVLVVRLAAMAFRITLPTYSERE
>Mature_204_residues
MENLLYWAGLSAVAVNALTGVLDAGRKRMDLIGVVMVGAATALGGGTVRDVLLARPVFWIADQVYLIVALAATLAVFFVV
RNLRLPPRLFLIPDAFGLALFTIVGTQIALEWQAPWLVASLLGMITGVVGGVLRDVLCNEVPLVFVRGELYASAAWLGAL
VLVGLQALSVSPVAAAWAGMATVLVVRLAAMAFRITLPTYSERE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=165, Percent_Identity=40.6060606060606, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=41.1764705882353, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21631; Mature: 21631

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLLYWAGLSAVAVNALTGVLDAGRKRMDLIGVVMVGAATALGGGTVRDVLLARPVFWI
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADQVYLIVALAATLAVFFVVRNLRLPPRLFLIPDAFGLALFTIVGTQIALEWQAPWLVAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHEEEECCHHHHHH
LLGMITGVVGGVLRDVLCNEVPLVFVRGELYASAAWLGALVLVGLQALSVSPVAAAWAGM
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ATVLVVRLAAMAFRITLPTYSERE
HHHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MENLLYWAGLSAVAVNALTGVLDAGRKRMDLIGVVMVGAATALGGGTVRDVLLARPVFWI
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADQVYLIVALAATLAVFFVVRNLRLPPRLFLIPDAFGLALFTIVGTQIALEWQAPWLVAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHEEEECCHHHHHH
LLGMITGVVGGVLRDVLCNEVPLVFVRGELYASAAWLGALVLVGLQALSVSPVAAAWAGM
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ATVLVVRLAAMAFRITLPTYSERE
HHHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA